RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CNR1P21554 472 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MMP11P24347 488 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 STOMP27105 288 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PDHA2P29803 388 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MMP12P39900 470 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CRYBB2P43320 205 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 GLIPR1P48060 266 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 COPB1P53618 953 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 LIMK2P53671 638 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ATP5J2P56134 94 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CLDN18P56856 261 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 TUBA4AP68366 448 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MAD2L1Q13257 205 aaPredicted RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 GK3PQ14409 553 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MESDQ14696 234 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 FASTKD3Q14CZ7 662 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 EMC2Q15006 297 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-202ENST00000278385 CA9Q16790 459 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 DUSP6Q16828 381 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CLLU1OSQ5K130 101 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PRAMEF17Q5VTA0 474 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 FAM71F2Q6NXP2 309 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 KIRREL2Q6UWL6 708 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ASCL4Q6XD76 172 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 TMEM184AQ6ZMB5 413 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ZNF788Q6ZQV5 615 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 H2BFWTQ7Z2G1 175 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MRPL21Q7Z2W9 205 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 DPY19L4Q7Z388 723 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SERPINA11Q86U17 422 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SLC26A11Q86WA9 606 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ZNF575Q86XF7 245 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CATSPER3Q86XQ3 398 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 SLC39A11Q8N1S5 342 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 GCSAMQ8N6F7 178 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PNLDC1Q8NA58 520 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 THAP8Q8NA92 274 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CYB561A3Q8NBI2 242 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 DDHD1Q8NEL9 900 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 OR52I2Q8NH67 350 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PPP4R1Q8TF05 950 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 FAM3CQ92520 227 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ECHDC3Q96DC8 303 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 LGALS12Q96DT0 336 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 AMDHD1Q96NU7 426 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 TSSK3Q96PN8 268 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 BTBD10Q9BSF8 475 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 NAT9Q9BTE0 207 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 FUCA2Q9BTY2 467 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 TSSK1BQ9BXA7 367 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 C1QTNF7Q9BXJ2 289 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CIPCQ9C0C6 399 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 OR51V1Q9H2C8 321 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 DPEP2Q9H4A9 486 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 FAM124BQ9H5Z6 455 aaPredicted RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 ASB8Q9H765 288 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 METTL8Q9H825 291 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 C10orf88Q9H8K7 445 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 Q9H8V8 135 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CHST11Q9NPF2 352 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-202ENST00000278385 ELOVL2Q9NXB9 296 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 CISD1Q9NZ45 108 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 RCC2Q9P258 522 aaKnown RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 SLC17A7Q9P2U7 560 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 PSMC3IPQ9P2W1 217 aaPredicted RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 WDR83OSQ9Y284 106 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.12□□□□□ -1.75
CD44-202ENST00000278385 CNTNAP2Q9UHC6 1331 aa4.12□□□□□ -1.75
CD44-202ENST00000278385 MYH6P13533 1939 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 FRG2CA6NGY1 282 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 E7ESA3 106 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 POC1B-GALNT4F8VUJ3 575 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 H7C1Q1 480 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 TRAFD1O14545 582 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 MBTPS2O43462 519 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SLC28A2O43868 658 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SNX3O60493 162 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 NOL4O94818 638 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 NSA2O95478 260 aaKnown RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 RAF1P04049 648 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 SERPINA6P08185 405 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 F7P08709 466 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 CHRM5P08912 532 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 CT45A8P0DMV1 189 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CT45A9P0DMV2 189 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CTSAP10619 480 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 HAPLN1P10915 354 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 IRF2P14316 349 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 IL9P15248 144 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CYP11B1P15538 503 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 GIFP27352 417 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 CDH5P33151 784 aaPredicted RBP4.11□□□□□ -1.75
CD44-202ENST00000278385 UGT1A5P35504 534 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 AHRP35869 848 aa4.11□□□□□ -1.75
CD44-202ENST00000278385 APOBEC1P41238 236 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms