RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 METTL7AQ9H8H3 244 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 TIGARQ9NQ88 270 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 VDAC3Q9Y277 283 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 A0A1W2PRG6 482 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 FABP12A6NFH5 140 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 NSA2O95478 260 aaKnown RBP8.33□□□□□ -1.08
SEC16A-201ENST00000277537 HTR1AP08908 422 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 GPR143P51810 404 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 ATP12AP54707 1039 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 SYT14P1Q58G82 188 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 CCDC71Q8IV32 467 aaPredicted RBP8.33□□□□□ -1.08
SEC16A-201ENST00000277537 SLC35F3Q8IY50 421 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 SHISA5Q8N114 240 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 TBC1D15Q8TC07 691 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 LPAR4Q99677 370 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 SYNPO2LQ9H987 977 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 GRHPRQ9UBQ7 328 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 WNT16Q9UBV4 365 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 CES1P1Q9UKY3 287 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 CACNA1HO95180 2353 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
SEC16A-201ENST00000277537 CENPVL1A0A0U1RR11 272 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 C9J4A7 227 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 RNF13O43567 381 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 PLOD3O60568 738 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 SCRG1O75711 98 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 F13BP05160 661 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 UBL4AP11441 157 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 JUNBP17275 347 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 EMP2P54851 167 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 WNT4P56705 351 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 AQP6Q13520 282 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 E2F2Q14209 437 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TRIM61Q5EBN2 209 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 SYT6Q5T7P8 510 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TMEM53Q6P2H8 277 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ULK3Q6PHR2 472 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 OR2L13Q8N349 312 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 OR4C15Q8NGM1 316 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ENKURQ8TC29 256 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 SMAP2Q8WU79 429 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 THEM6Q8WUY1 208 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 AP3S1Q92572 193 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 FOXN4Q96NZ1 517 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 GFM1Q96RP9 751 aaKnown RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TMEM185BQ9H7F4 350 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 HHATLQ9HCP6 504 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 FAIMQ9NVQ4 179 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ERVK13-1Q9NX77 482 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 EXOSC1Q9Y3B2 195 aaKnown RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ARHGEF9O43307 516 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 HLA-DPB1P04440 258 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 CTXN1P60606 82 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ACY1Q03154 408 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 KRT74Q7RTS7 529 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 OR4C3Q8NH37 302 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 NEIL3Q8TAT5 605 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ADAD1Q96M93 576 aaKnown RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 GAL3ST1Q99999 423 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 DEFB126Q9BYW3 111 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 UBQLN3Q9H347 655 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 GPN2Q9H9Y4 310 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TRIM36Q9NQ86 728 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 UBQLN4Q9NRR5 601 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 CNOT2Q9NZN8 540 aaKnown RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ADAM30Q9UKF2 790 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 SERINC4A6NH21 518 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 A8MV72 311 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 CAV3P56539 151 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 HSD17B7P56937 341 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 OC90Q02509 493 aaPredicted RBP8.32□□□□□ -1.08
SEC16A-201ENST00000277537 DDI2Q5TDH0 399 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 RASSF6Q6ZTQ3 369 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 CHMP1BQ7LBR1 199 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 ZAR1Q86SH2 424 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 GID4Q8IVV7 300 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TMEM156Q8N614 296 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 PITX2Q99697 317 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 TAPBPLQ9BX59 468 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 MMP27Q9H306 513 aa8.32□□□□□ -1.08
SEC16A-201ENST00000277537 CTDSP2O14595 271 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 NDUFB2O95178 105 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 FOLR1P15328 257 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 HOXB9P17482 250 aaPredicted RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 EDNRAP25101 427 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 MAGEA8P43361 318 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 EMDP50402 254 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 DUSP8Q13202 625 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 CRMP1Q14194 572 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 NR0B2Q15466 257 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 ZNF628Q5EBL2 1059 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 GARNL3Q5VVW2 1013 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 MZT2AQ6P582 158 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 BBS1Q8NFJ9 593 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 MOSPD2Q8NHP6 518 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 APH1BQ8WW43 257 aa8.31□□□□□ -1.08
SEC16A-201ENST00000277537 SPRYD4Q8WW59 207 aaPredicted RBP8.31□□□□□ -1.08
SEC16A-201ENST00000277537 TESQ9UGI8 421 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms