RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KLF7O75840 302 aaPredicted RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 WISP1O95388 367 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 NADKO95544 446 aaPredicted RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 FADS2O95864 444 aaKnown RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 IFI30P13284 250 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 CSNK2BP67870 215 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 PLCXD2Q0VAA5 305 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 ALG10BQ5I7T1 473 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 CLEC12AQ5QGZ9 265 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 CLVS1Q8IUQ0 354 aaPredicted RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 CADM2Q8N3J6 435 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 C3orf49Q96BT1 292 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 HSPBAP1Q96EW2 488 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 DOK1Q99704 481 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 COPS4Q9BT78 406 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TOR4AQ9NXH8 423 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 SLC39A1Q9NY26 324 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 B3GALT1Q9Y5Z6 326 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 PCNX3Q9H6A9 2034 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 MPZL2O60487 215 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 REM1O75628 298 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 UBL4AP11441 157 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 PCYT1AP49585 367 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 IRF3Q14653 427 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TMPRSS11FQ6ZWK6 438 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 ULBP3Q9BZM4 244 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 EXOSC3Q9NQT5 275 aaKnown RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 CDH10Q9Y6N8 788 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 ENO4A6NNW6 628 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 B4DXG7 233 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 B4E171 279 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TMX2-CTNND1H3BSU7 103 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 MRPS14O60783 128 aaKnown RBP11.1□□□□□ -0.63
SDE2-201ENST00000272091 STSP08842 583 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 GSTT1P30711 240 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TSPAN7P41732 249 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 MLLT10P55197 1068 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 ZNF117Q03924 483 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 SLC30A6Q6NXT4 461 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 MARCH3Q86UD3 253 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 CLDN22Q8N7P3 220 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TEX47Q8TBZ9 253 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 PHOSPHO1Q8TCT1 267 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 TAS2R16Q9NYV7 291 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 SNX5Q9Y5X3 404 aa11.1□□□□□ -0.63
SDE2-201ENST00000272091 IGKV1D-42A0A075B6H8 117 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SH3D21A4FU49 640 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 UNC119BA6NIH7 251 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SCDO00767 359 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 FADS1O60427 444 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SMSP52788 366 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 OCLNQ16625 522 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SYT14P1Q58G82 188 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 HLA-DQA1Q5Y7H0 255 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SLC27A4Q6P1M0 643 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 FAM26EQ8N5C1 309 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 ZNF527Q8NB42 609 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 GALNT6Q8NCL4 622 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 OR13C2Q8NGS9 318 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 RNF217Q8TC41 542 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 BPIFA2Q96DR5 249 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 TSSK6Q9BXA6 273 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 CCNB1IP1Q9NPC3 277 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 CCDC160A6NGH7 325 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 GNB5O14775 395 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 PTP4A3O75365 173 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 IL12BP29460 328 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 LCN1P31025 176 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 RBM34P42696 430 aaKnown RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 SLC26A5P58743 744 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 PCOLCEQ15113 449 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 ULK3Q6PHR2 472 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 BRIX1Q8TDN6 353 aaKnown RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 TRUB1Q8WWH5 349 aaKnown RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 TP53INP1Q96A56 240 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 CLN6Q9NWW5 311 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 LOXL2Q9Y4K0 774 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 ZNF99A8MXY4 864 aaPredicted RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 LCKP06239 509 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 GAS1P54826 345 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SPEM2Q0P670 501 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 THAP3Q8WTV1 239 aaPredicted RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 METTL21AQ8WXB1 218 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 ZNF582Q96NG8 517 aaPredicted RBP11.09□□□□□ -0.63
SDE2-201ENST00000272091 TBC1D23Q9NUY8 699 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 SIGLEC7Q9Y286 467 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
SDE2-201ENST00000272091 MED31Q9Y3C7 131 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms