RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 CTSFQ9UBX1 484 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 PNMA8CA0A1B0GUJ8 204 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 A0A1W2PQM1 296 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 TIAF1O95411 115 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 RAB36O95755 333 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 IGKV3-11P04433 115 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 LIPKQ5VXJ0 399 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 LINC00114Q6XXX2 140 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 LINC00299Q6ZSB3 139 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 UBALD2Q8IYN6 164 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 PROKR2Q8NFJ6 384 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 OR2T33Q8NG76 320 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 HS6ST2Q96MM7 605 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 SLC38A2Q96QD8 506 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 NUDT9Q9BW91 350 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 WDR12Q9GZL7 423 aaKnown RBP21.29■■□□□ 1
RAB40B-201ENST00000269347 POLR2J2Q9GZM3 115 aaKnown RBP21.29■■□□□ 1
RAB40B-201ENST00000269347 FGF21Q9NSA1 209 aa21.29■■□□□ 1
RAB40B-201ENST00000269347 COL5A1P20908 1838 aaPredicted RBP21.28■■□□□ 1
RAB40B-201ENST00000269347 METTL15A6NJ78 407 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 CHP2O43745 196 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 PTP4A3O75365 173 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 EPHA8P29322 1005 aaPredicted RBP21.28■■□□□ 1
RAB40B-201ENST00000269347 UGT2B10P36537 528 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 CRYBB2P43320 205 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 CDH11P55287 796 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 ITGADQ13349 1161 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 ALG10BQ5I7T1 473 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 RNLSQ5VYX0 342 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 PMS2CLQ68D20 193 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 CBLN3Q6UW01 205 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 DCDC5Q6ZRR9 648 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 LANCL3Q6ZV70 420 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 TMPRSS11FQ6ZWK6 438 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 LHFPL3Q86UP9 236 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 MAML2Q8IZL2 1156 aaPredicted RBP21.28■■□□□ 1
RAB40B-201ENST00000269347 LRRC17Q8N6Y2 441 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 SLC2A12Q8TD20 617 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 PPP1R14BQ96C90 147 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 TMEM27Q9HBJ8 222 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 FGF20Q9NP95 211 aaPredicted RBP21.28■■□□□ 1
RAB40B-201ENST00000269347 QPCTLQ9NXS2 382 aa21.28■■□□□ 1
RAB40B-201ENST00000269347 CBFA2T3O75081 653 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 GUSBP08236 651 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 ATP1A4Q13733 1029 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 SERTAD2Q14140 314 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 COX15Q7KZN9 410 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 RNF113BQ8IZP6 322 aaKnown RBP21.27■■□□□ 1
RAB40B-201ENST00000269347 CENPSQ8N2Z9 138 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 CLDN22Q8N7P3 220 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 LSMEM1Q8N8F7 131 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 SNRNP27Q8WVK2 155 aaKnown RBP21.27■■□□□ 1
RAB40B-201ENST00000269347 S100ZQ8WXG8 99 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 GATAD2BQ8WXI9 593 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 TNFRSF13CQ96RJ3 184 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 MND1Q9BWT6 205 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 FBXL4Q9UKA2 621 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 CPED1A4D0V7 1026 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 SERINC4A6NH21 518 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 WISP1O95388 367 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 OCM2P0CE71 109 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 OCMP0CE72 109 aaPredicted RBP21.27■■□□□ 1
RAB40B-201ENST00000269347 RGS19P49795 217 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 GPLD1P80108 840 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 DSG2Q14126 1118 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 RGS21Q2M5E4 152 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 KLHL26Q53HC5 615 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 FNDC7Q5VTL7 733 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 PLBD1Q6P4A8 553 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 PRSS42Q7Z5A4 293 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 PHC2Q8IXK0 858 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 SIRT6Q8N6T7 355 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 ZNF485Q8NCK3 441 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 ADIPOR1Q96A54 375 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 ZNF304Q9HCX3 659 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.27■■□□□ 1
RAB40B-201ENST00000269347 MED31Q9Y3C7 131 aa21.27■■□□□ 1
RAB40B-201ENST00000269347 CSTAP01040 98 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 CLUP10909 449 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 NOS3P29474 1203 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 CTBP2P56545 445 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 GXYLT1Q4G148 440 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 WDR74Q6RFH5 385 aaPredicted RBP21.26■□□□□ 0.99
RAB40B-201ENST00000269347 C9orf40Q8IXQ3 194 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 ZFP41Q8N8Y5 198 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 SAP25Q8TEE9 199 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 CHPT1Q8WUD6 406 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 PILRBQ9UKJ0 227 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 TCRBV16S1A1N1A0A5B0 115 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 PATE3B3GLJ2 98 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 SIGLEC6O43699 453 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 SULT1C4O75897 302 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 SAGP10523 405 aaPredicted RBP21.26■□□□□ 0.99
RAB40B-201ENST00000269347 GALNSP34059 522 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 TGM4P49221 684 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 RAB40BQ12829 278 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.26■□□□□ 0.99
RAB40B-201ENST00000269347 QSOX2Q6ZRP7 698 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 PTP4A1Q93096 173 aa21.26■□□□□ 0.99
RAB40B-201ENST00000269347 OTULINQ96BN8 352 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms