RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 F13BP05160 661 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 MAGEA8P43361 318 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 TFF2Q03403 129 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 KEAP1Q14145 624 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 MOGQ16653 247 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 CNEP1R1Q8N9A8 125 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 OLIG1Q8TAK6 271 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 FOXN4Q96NZ1 517 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 NUDT22Q9BRQ3 303 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 FUNDC2Q9BWH2 189 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 LRRN3Q9H3W5 708 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 TRPV4Q9HBA0 871 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 WSB2Q9NYS7 404 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 PMF1-BGLAPU3KQ54 211 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 TEX13DA0A0J9YY54 714 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 LCMT2O60294 686 aaKnown RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 SLC16A7O60669 478 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 UTS2O95399 124 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 LCKP06239 509 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 TACR3P29371 465 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 RRADP55042 308 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 STK11Q15831 433 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 PRSS36Q5K4E3 855 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 MFSD12Q6NUT3 480 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 FAM217AQ8IXS0 508 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 FBXO9Q9UK97 447 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 CAMK2AQ9UQM7 478 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 SF3B4Q15427 424 aaKnown RBP eCLIP12.78□□□□□ -0.363e-9■■■■■ 52.6
NPC1-201ENST00000269228 NLRP8Q86W28 1048 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 NRG4Q8WWG1 115 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 LYRM4Q9HD34 91 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 ZNF701Q9NV72 531 aaPredicted RBP12.78□□□□□ -0.36
NPC1-201ENST00000269228 RLIMQ9NVW2 624 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
NPC1-201ENST00000269228 RLN2P04090 185 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 MYF5P13349 255 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 HSD17B7P56937 341 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 B4GALNT1Q00973 533 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 PDE7AQ13946 482 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 URM1Q9BTM9 101 aaKnown RBP12.77□□□□□ -0.36
NPC1-201ENST00000269228 SGPP1Q9BX95 441 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 DDX31Q9H8H2 851 aaKnown RBP12.77□□□□□ -0.36
NPC1-201ENST00000269228 WASH6PQ9NQA3 447 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 ANKRD10Q9NXR5 420 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 ZNF16P17020 682 aaPredicted RBP12.77□□□□□ -0.36
NPC1-201ENST00000269228 AKR1D1P51857 326 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 GFERP55789 205 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 HERV-K104P61576 105 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 SPRED2Q7Z698 418 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 ZNF578Q96N58 590 aaPredicted RBP12.77□□□□□ -0.36
NPC1-201ENST00000269228 PLEK2Q9NYT0 353 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 ZNF69Q9UC07 566 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 MEMO1Q9Y316 297 aa12.77□□□□□ -0.36
NPC1-201ENST00000269228 TEX13CA0A0J9YWL9 993 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 KRBA1A5PL33 1030 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SYT7O43581 403 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SLC19A2O60779 497 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SOX3P41225 446 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 CAPZBP47756 277 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 TPTEP56180 551 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 ECH1Q13011 328 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 LRRN1Q6UXK5 716 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 NINJ1Q92982 152 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 FER1L6-AS2Q96M78 137 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 BEX2Q9BXY8 128 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 BEX1Q9HBH7 125 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 NUFIP1Q9UHK0 495 aaKnown RBP12.77□□□□□ -0.37
NPC1-201ENST00000269228 PPT2Q9UMR5 302 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 DOCK5Q9H7D0 1870 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 NRXN2Q9P2S2 1712 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 A0A1W2PR48 441 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 TRMT12Q53H54 448 aaKnown RBP12.77□□□□□ -0.37
NPC1-201ENST00000269228 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 ZNF160Q9HCG1 818 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 SLC17A4Q9Y2C5 497 aa12.77□□□□□ -0.37
NPC1-201ENST00000269228 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
NPC1-201ENST00000269228 IL9P15248 144 aa12.76□□□□□ -0.37
NPC1-201ENST00000269228 GRK5P34947 590 aa12.76□□□□□ -0.37
NPC1-201ENST00000269228 WNT4P56705 351 aa12.76□□□□□ -0.37
NPC1-201ENST00000269228 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
NPC1-201ENST00000269228 ALG14Q96F25 216 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms