RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SMN1Q16637 294 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 ALG10BQ5I7T1 473 aa15□□□□□ -0.01
TPM1-201ENST00000267996 C16orf47Q6ZP98 133 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 TMPRSS11FQ6ZWK6 438 aa15□□□□□ -0.01
TPM1-201ENST00000267996 SATL1Q86VE3 508 aa15□□□□□ -0.01
TPM1-201ENST00000267996 GATSQ8NAP1 163 aa15□□□□□ -0.01
TPM1-201ENST00000267996 GRHL3Q8TE85 626 aa15□□□□□ -0.01
TPM1-201ENST00000267996 RNF138Q8WVD3 245 aa15□□□□□ -0.01
TPM1-201ENST00000267996 DNAJA4Q8WW22 397 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 TRUB1Q8WWH5 349 aaKnown RBP15□□□□□ -0.01
TPM1-201ENST00000267996 CCNL2Q96S94 520 aaPredicted RBP15□□□□□ -0.01
TPM1-201ENST00000267996 RTN4RQ9BZR6 473 aa15□□□□□ -0.01
TPM1-201ENST00000267996 DSN1Q9H410 356 aa15□□□□□ -0.01
TPM1-201ENST00000267996 SCN3BQ9NY72 215 aa15□□□□□ -0.01
TPM1-201ENST00000267996 IL20Q9NYY1 176 aa15□□□□□ -0.01
TPM1-201ENST00000267996 NDUFA13Q9P0J0 144 aa15□□□□□ -0.01
TPM1-201ENST00000267996 TMEM5Q9Y2B1 443 aa15□□□□□ -0.01
TPM1-201ENST00000267996 TPRKBQ9Y3C4 175 aa15□□□□□ -0.01
TPM1-201ENST00000267996 MED31Q9Y3C7 131 aa15□□□□□ -0.01
TPM1-201ENST00000267996 SMIM31A0A1B0GVY4 71 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 GTPBP1O00178 669 aaKnown RBP14.99□□□□□ -0.01
TPM1-201ENST00000267996 EIF4E2O60573 245 aaKnown RBP14.99□□□□□ -0.01
TPM1-201ENST00000267996 EEF1B2P24534 225 aaKnown RBP14.99□□□□□ -0.01
TPM1-201ENST00000267996 GPR4P46093 362 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 GINS1Q14691 196 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 HES3Q5TGS1 186 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 CBLN3Q6UW01 205 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 OR8D4Q8NGM9 314 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 COL25A1Q9BXS0 654 aaPredicted RBP14.99□□□□□ -0.01
TPM1-201ENST00000267996 PLA2G12AQ9BZM1 189 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 MEPEQ9NQ76 525 aaPredicted RBP14.99□□□□□ -0.01
TPM1-201ENST00000267996 CARD8Q9Y2G2 431 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 EXPH5Q8NEV8 1989 aa14.99□□□□□ -0.01
TPM1-201ENST00000267996 A0A087WUJ7 227 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 CDC42EP2O14613 210 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 MRPS14O60783 128 aaKnown RBP14.98□□□□□ -0.01
TPM1-201ENST00000267996 JUNBP17275 347 aaPredicted RBP14.98□□□□□ -0.01
TPM1-201ENST00000267996 MAKP20794 623 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 EVI2BP34910 448 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 FOLR3P41439 243 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 SLC6A8P48029 635 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 COPZ1P61923 177 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 EFNB1P98172 346 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 TMEM201Q5SNT2 666 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 LYPD8Q6UX82 237 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 ZNF620Q6ZNG0 422 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 MARCH3Q86UD3 253 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 SPARTQ8N0X7 666 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 CADM2Q8N3J6 435 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 PFN4Q8NHR9 129 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 HGDQ93099 445 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 C3orf49Q96BT1 292 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 EGLN3Q9H6Z9 239 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 C20orf141Q9NUB4 165 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 MYOTQ9UBF9 498 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 ICAM5Q9UMF0 924 aa14.98□□□□□ -0.01
TPM1-201ENST00000267996 M0R129 80 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 WWP2O00308 870 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SOCS6O14544 535 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 NDUFB5O43674 189 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 IFI30P13284 250 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SMSP52788 366 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 ZNF117Q03924 483 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 EXT1Q16394 746 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PLAG1Q6DJT9 500 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 ACSM5Q6NUN0 579 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PTCHD4Q6ZW05 846 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 P3H2Q8IVL5 708 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 TEX47Q8TBZ9 253 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 M1APQ8TC57 530 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 THAP3Q8WTV1 239 aaPredicted RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 CT55Q8WUE5 264 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 IPCEF1Q8WWN9 437 aaPredicted RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 OSTF1Q92882 214 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 FGF11Q92914 225 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SIGLEC11Q96RL6 698 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 NODALQ96S42 347 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 TBL1XR1Q9BZK7 514 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 ZBTB20Q9HC78 741 aaPredicted RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 MMP25Q9NPA2 562 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 FKBP14Q9NWM8 211 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PSORS1C1Q9UIG5 152 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PCDHGB1Q9Y5G3 927 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 CDH10Q9Y6N8 788 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SH3D21A4FU49 640 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 UNC119BA6NIH7 251 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PTGES3LE9PB15 166 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 FAM20BO75063 409 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SLC25A30Q5SVS4 291 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SLC27A4Q6P1M0 643 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 BORAQ6PGQ7 559 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 KCTD8Q6ZWB6 473 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 NUP54Q7Z3B4 507 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 CACTIN-AS1Q8N1I8 211 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 IQCF1Q8N6M8 205 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 OR11G2Q8NGC1 345 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 OR8J1Q8NGP2 316 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 RNF217Q8TC41 542 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms