RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 COQ4Q9Y3A0 265 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ADAMTS13Q76LX8 1427 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 FAM221BA6H8Z2 402 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SCGB1C2P0DMR2 95 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 HOXD13P35453 343 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 CXADRP78310 365 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 OR9K2Q8NGE7 335 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ANGPTL6Q8NI99 470 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 HADHBP55084 474 aaKnown RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 CDKN2DP55273 166 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LILRA4P59901 499 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 BAXQ07812 192 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 NADSYN1Q6IA69 706 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 TMEM130Q8N3G9 435 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 OR2T4Q8NH00 348 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SPTSSAQ969W0 71 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GLIS2Q9BZE0 524 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 IL26Q9NPH9 171 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 THSD1Q9NS62 852 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SLC22A23A1A5C7 686 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GAPDHSO14556 408 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 HOXA1P49639 335 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 GATMP50440 423 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 TLE4Q04727 773 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 FOXN4Q96NZ1 517 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 CEP170BQ9Y4F5 1589 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 SPTBN2O15020 2390 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GPR25O00155 361 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 TP53I11O14683 189 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SYN3O14994 580 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 KLF8O95600 359 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 MAT1AQ00266 395 aaKnown RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 FAM122BQ7Z309 247 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SLCO2A1Q92959 643 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 DPH1Q9BZG8 443 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SLC39A9Q9NUM3 307 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 NSA2O95478 260 aaKnown RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 PIM1P11309 404 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 MMP12P39900 470 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 FOXK1P85037 733 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 CMPK2Q5EBM0 449 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 PLCXD3Q63HM9 321 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LIX1LQ8IVB5 337 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SUMO1P63165 101 aaKnown RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 OR10Z1Q8NGY1 313 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LRIG1Q96JA1 1093 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 FLVCR2Q9UPI3 526 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 NFKBIEO00221 500 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 DPM1O60762 260 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 PTPN2P17706 415 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LAG3P18627 525 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 RNF212Q495C1 297 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 C15orf54Q8N8G6 183 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 NLGN4YQ8NFZ3 816 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.53□□□□□ -0.72
CHFR-201ENST00000266880 LIPT1Q9Y234 373 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ACTL7AQ9Y615 435 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 POM121BA6NF01 834 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
CHFR-201ENST00000266880 P2RX6O15547 441 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 LCATP04180 440 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GLAP06280 429 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 UBE2G2P60604 165 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 GHRHRQ02643 423 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 SF3B4Q15427 424 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■■□ 23.6
CHFR-201ENST00000266880 B3GNT8Q7Z7M8 397 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 B4GALT7Q9UBV7 327 aa10.53□□□□□ -0.72
CHFR-201ENST00000266880 ZNF207O43670 478 aaKnown RBP10.52□□□□□ -0.72
CHFR-201ENST00000266880 GMPRP36959 345 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 HAAOP46952 286 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 ELLP55199 621 aaPredicted RBP10.52□□□□□ -0.72
CHFR-201ENST00000266880 C4orf17Q53FE4 359 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 AADACL3Q5VUY0 350 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 BRAT1Q6PJG6 821 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 FOXR2Q6PJQ5 311 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 COMMD1Q8N668 190 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 OR8J2Q8NGG1 315 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 PRRC1Q96M27 445 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 ZFP92A6NM28 416 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 FAM163BP0C2L3 166 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 PGGT1BP53609 377 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 PTTG1IPP53801 180 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 C4orf32Q8N8J7 132 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 PGAP3Q96FM1 320 aaPredicted RBP10.52□□□□□ -0.72
CHFR-201ENST00000266880 TEPSINQ96N21 525 aa10.52□□□□□ -0.72
CHFR-201ENST00000266880 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.72
CHFR-201ENST00000266880 DICER1Q9UPY3 1922 aaKnown RBP10.52□□□□□ -0.72
CHFR-201ENST00000266880 LTC4SQ16873 150 aa10.52□□□□□ -0.73
CHFR-201ENST00000266880 LYPD4Q6UWN0 246 aa10.52□□□□□ -0.73
CHFR-201ENST00000266880 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
CHFR-201ENST00000266880 NFS1Q9Y697 457 aa10.52□□□□□ -0.73
CHFR-201ENST00000266880 DIP2AQ14689 1571 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms