RNA–Protein interactions for RNA: ENST00000263233.8

SYP-201, Transcript of synaptophysin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYP, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-201ENST00000263233 CCDC120Q96HB5 630 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 C10orf90Q96M02 699 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 MS4A4EQ96PG1 132 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 COPZ2Q9P299 210 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 MRPS7Q9Y2R9 242 aaKnown RBP13.84□□□□□ -0.19
SYP-201ENST00000263233 NPFFR2Q9Y5X5 522 aa13.84□□□□□ -0.19
SYP-201ENST00000263233 RPS10-NUDT3A0A1W2PQS6 291 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 FAM86C2PA6NEL3 165 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 LYPD3O95274 346 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ADH1CP00326 375 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 MT-ND4P03905 459 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 GKN3PP0CG01 181 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 PEPDP12955 493 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 PEBP1P30086 187 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 BTN3A2P78410 334 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 EXOSC2Q13868 293 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 MAPK14Q16539 360 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 DUSP5Q16690 384 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ARHGAP11BQ3KRB8 267 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 HSD17B12Q53GQ0 312 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SYT9Q86SS6 491 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ASPGQ86U10 573 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 RANBP3LQ86VV4 465 aaPredicted RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 TEX19Q8NA77 164 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 LRRC20Q8TCA0 184 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 GHSRQ92847 366 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 COL26A1Q96A83 441 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 IFT27Q9BW83 186 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 TMEM168Q9H0V1 697 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 DLL4Q9NR61 685 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SPHK1Q9NYA1 384 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 NUP50Q9UKX7 468 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 A0A1B0GVI7 797 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 A0A1W2PPK0 400 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 A0A1W2PRG6 482 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 CIB4A0PJX0 185 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 OTOL1A6NHN0 477 aaPredicted RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 OR52A4PA6NMU1 304 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ASGR2P07307 311 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ZNF250P15622 560 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 ZNF81P51508 661 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 PITPNAQ00169 270 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 DUSP8Q13202 625 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SNTA1Q13424 505 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 OR1Q1Q15612 314 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 GPR68Q15743 365 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 BTN2A1Q7KYR7 527 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SSX6Q7RTT6 188 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SRFBP1Q8NEF9 429 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 C7orf57Q8NEG2 295 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 OR13C2Q8NGS9 318 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 PCNPQ8WW12 178 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 SMPDL3BQ92485 455 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 SMAD5Q99717 465 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 HDAC8Q9BY41 377 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 GSDMCQ9BYG8 508 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 CACYBPQ9HB71 228 aaKnown RBP13.83□□□□□ -0.2
SYP-201ENST00000263233 NTMQ9P121 344 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 FBXL4Q9UKA2 621 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 PLEKHM1Q9Y4G2 1056 aa13.83□□□□□ -0.2
SYP-201ENST00000263233 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 TBC1D3BA6NDS4 549 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 I3L521 148 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 RNGTTO60942 597 aaKnown RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 WNT1P04628 370 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 SLC2A5P22732 501 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 DNASE1P24855 282 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 PYCR1P32322 319 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 TSFMP43897 325 aaKnown RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 RAG2P55895 527 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 NRG3P56975 720 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 SNRPNP63162 240 aaKnown RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 HSF2Q03933 536 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 KLF9Q13886 244 aaPredicted RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 MTFR2Q6P444 385 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 GET4Q7L5D6 327 aaPredicted RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 DGLUCYQ7Z3D6 616 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 RNF113BQ8IZP6 322 aaKnown RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 PIAS4Q8N2W9 510 aaPredicted RBP13.82□□□□□ -0.2
SYP-201ENST00000263233 MFSD9Q8NBP5 474 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 OMA1Q96E52 524 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 PEX11GQ96HA9 241 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 SDF2Q99470 211 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 SARGQ9BW04 601 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 TEX101Q9BY14 249 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 ST6GALNAC2Q9UJ37 374 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 MOSPD1Q9UJG1 213 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 OR5K3A6NET4 321 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 TRABD2BA6NFA1 517 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 LRRN3E7EW58 273 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 RCBTB2O95199 551 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 EPXP11678 715 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 UGT2B7P16662 529 aa13.82□□□□□ -0.2
SYP-201ENST00000263233 NDUFS1P28331 727 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms