RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 RNF145Q96MT1 663 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 SPATA5L1Q9BVQ7 753 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 ANAPC2Q9UJX6 822 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 HRH3Q9Y5N1 445 aa25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 CHCHD2Q9Y6H1 151 aaPredicted RBP25.16■■□□□ 1.62
SMARCD3-201ENST00000262188 FAM172BPA6NC97 362 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 K7ENP7 123 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 SCDO00767 359 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 IFNA14P01570 189 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 CCL3P10147 92 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 NID1P14543 1247 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 PRKACBP22694 351 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 SOX8P57073 446 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 LARS2Q15031 903 aaKnown RBP25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 INO80CQ6PI98 192 aaPredicted RBP25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 EID3Q8N140 333 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 TMCO5AQ8N6Q1 288 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 HPS1Q92902 700 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 CRELD1Q96HD1 420 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 AGAP4Q96P64 663 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 TEKT2Q9UIF3 430 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 PCDHGB5Q9Y5G0 923 aa25.15■■□□□ 1.62
SMARCD3-201ENST00000262188 hCG_2039718K7EN88 272 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 ADAM10O14672 748 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 CYP7B1O75881 506 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 CRYZL1O95825 349 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 GUSBP08236 651 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 GKN3PP0CG01 181 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 NAGAP17050 411 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 CD96P40200 585 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 EFR3AQ14156 821 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 MTX3Q5HYI7 312 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 SPINK14Q6IE38 97 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 ERMP1Q7Z2K6 904 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 CADM3Q8N126 398 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 CYP4Z2PQ8N1L4 340 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 GIMAP1Q8WWP7 306 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 ZNF597Q96LX8 424 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 PINK1Q9BXM7 581 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 PTPRQQ9UMZ3 2332 aa25.14■■□□□ 1.62
SMARCD3-201ENST00000262188 SERINC4A6NH21 518 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 CLOCKO15516 846 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 DIRAS1O95057 198 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 CCDC159P0C7I6 412 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 YAP1P46937 504 aaKnown RBP25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 FGFBP1Q14512 234 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 INPP5JQ15735 1006 aaPredicted RBP25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 C6orf52Q5T4I8 152 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 OR5M10Q6IEU7 315 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 USP43Q70EL4 1123 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 NUP54Q7Z3B4 507 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 PHOSPHO1Q8TCT1 267 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 SIGLEC12Q96PQ1 595 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 TBL1XR1Q9BZK7 514 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 CACYBPQ9HB71 228 aaKnown RBP25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 NTNG1Q9Y2I2 539 aa25.14■■□□□ 1.61
SMARCD3-201ENST00000262188 TRIM64A6NGJ6 449 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 ADAM11O75078 769 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PRG2P13727 222 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PRKAR1BP31321 381 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PSPHP78330 225 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 VLDLRP98155 873 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 TUBA3EQ6PEY2 450 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 ISLR2Q6UXK2 745 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 APOBEC4Q8WW27 367 aaKnown RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 TMCO6Q96DC7 493 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 SH3YL1Q96HL8 342 aaPredicted RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 TUBA1CQ9BQE3 449 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 SIAEQ9HAT2 523 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 DAPK2Q9UIK4 370 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 CDHR4A6H8M9 788 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 B4DXG7 233 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 NOL3O60936 208 aaKnown RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 LGI1O95970 557 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 THBS1P07996 1170 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PSMA4P25789 261 aaKnown RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PTGDSP41222 190 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 CXADRP78310 365 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 FOXD4Q12950 439 aaPredicted RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 FNDC7Q5VTL7 733 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 TSEN54Q7Z6J9 526 aaKnown RBP25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF527Q8NB42 609 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 PROX1Q92786 737 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 HES7Q9BYE0 225 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 HOXD1Q9GZZ0 328 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 METTL7AQ9H8H3 244 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 CTPS2Q9NRF8 586 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 KLRF1Q9NZS2 232 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 CSAG2Q9Y5P2 127 aa25.13■■□□□ 1.61
SMARCD3-201ENST00000262188 H3BMQ9 156 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 SEMG1P04279 462 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 HLCSP50747 726 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF846Q147U1 533 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 IFI44LQ53G44 452 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 CBLN3Q6UW01 205 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 COG8Q96MW5 612 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 ALPK1Q96QP1 1244 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 ZNF347Q96SE7 839 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 BAG5Q9UL15 447 aa25.12■■□□□ 1.61
SMARCD3-201ENST00000262188 TMA7Q9Y2S6 64 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms