RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PRAMEF25A6NGN4 478 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 A6NNC1 897 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 TGFBR3LH3BV60 316 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 NME2P1O60361 137 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 SERPINB7O75635 380 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 SLC25A12O75746 678 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 ALPLP05186 524 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 CHRM4P08173 479 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 CT62P0C5K7 136 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 ETS2P15036 469 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 ITGA2P17301 1181 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 FPR1P21462 350 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 NME2P22392 152 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 GALNSP34059 522 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 KCNJ5P48544 419 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 EFNA3P52797 238 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 SLC13A2Q13183 592 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 DUSP7Q16829 419 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 ATAD3BQ5T9A4 648 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 KRT73Q86Y46 540 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 PLPP5Q8NEB5 264 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 C7orf57Q8NEG2 295 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 GPR32P1Q8NGA4 272 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 MAGEE2Q8TD90 523 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 ADAMTS15Q8TE58 950 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 TFAP2CQ92754 450 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 OTUB1Q96FW1 271 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 COX4I2Q96KJ9 171 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 TRNT1Q96Q11 434 aaKnown RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 ZNF300Q96RE9 604 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 ZNF347Q96SE7 839 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 SPATA5L1Q9BVQ7 753 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 ZNF696Q9H7X3 374 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 CXorf21Q9HAI6 301 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 SMPD3Q9NY59 655 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 NDUFAF4Q9P032 175 aa12.14□□□□□ -0.47
SGCA-201ENST00000262018 C19orf25Q9UFG5 118 aaPredicted RBP12.14□□□□□ -0.47
SGCA-201ENST00000262018 IGKV3D-11A0A0A0MRZ8 115 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 SMIM31A0A1B0GVY4 71 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 H7C1Q1 480 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 OR10H2O60403 315 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 E2F6O75461 281 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 DIRAS1O95057 198 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 FESP07332 822 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 ACP2P11117 423 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 RFC3P40938 356 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 MAP3K8P41279 467 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 STX4Q12846 297 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 MERTKQ12866 999 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 NSDHLQ15738 373 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 OTUD3Q5T2D3 398 aaPredicted RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 SHEQ5VZ18 495 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 CARM1Q86X55 608 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 SLC16A11Q8NCK7 471 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 SIMC1Q8NDZ2 872 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 HOXB13Q92826 284 aaPredicted RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 COL21A1Q96P44 957 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 STACQ99469 402 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 EPYCQ99645 322 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 PELOQ9BRX2 385 aaKnown RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 ADI1Q9BV57 179 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 RSPO3Q9BXY4 272 aaPredicted RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 ALOXE3Q9BYJ1 711 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 AMBRA1Q9C0C7 1298 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 SLC38A1Q9H2H9 487 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 PIGUQ9H490 435 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 EXD2Q9NVH0 621 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 MAGED1Q9Y5V3 778 aaPredicted RBP12.13□□□□□ -0.47
SGCA-201ENST00000262018 ENPP4Q9Y6X5 453 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 DSPPQ9NZW4 1301 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 MXRA5Q9NR99 2828 aa12.13□□□□□ -0.47
SGCA-201ENST00000262018 TCRBV16S1A1N1A0A5B0 115 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 OR2W5A6NFC9 320 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
SGCA-201ENST00000262018 ADAMDEC1O15204 470 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 HS6ST1O60243 411 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 COQ9O75208 318 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 H6PDO95479 791 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 CBX7O95931 251 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 MAOAP21397 527 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 S1PR1P21453 382 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 STT3AP46977 705 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 OR1E2P47887 323 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 RPS6KA3P51812 740 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 ARHGDIAP52565 204 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 BTG2P78543 158 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
SGCA-201ENST00000262018 SERTAD2Q14140 314 aa12.12□□□□□ -0.47
SGCA-201ENST00000262018 DUSP5Q16690 384 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms