RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TSPAN7P41732 249 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 MASP1P48740 699 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 SMSP52788 366 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 GTF2IRD2BQ6EKJ0 949 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 SLC27A4Q6P1M0 643 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 BCDIN3DQ7Z5W3 292 aaKnown RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 GTF2IRD2Q86UP8 949 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 CLVS1Q8IUQ0 354 aaPredicted RBP20.51■□□□□ 0.87
SIX3-201ENST00000260653 GALNT6Q8NCL4 622 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 OR8J1Q8NGP2 316 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 ZNF426Q9BUY5 554 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 SLC25A19Q9HC21 320 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 TMEM9BQ9NQ34 198 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 TBC1D23Q9NUY8 699 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 CLN6Q9NWW5 311 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 IL20Q9NYY1 176 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 DNAJC27Q9NZQ0 273 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 MED31Q9Y3C7 131 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 PCDHGB1Q9Y5G3 927 aa20.51■□□□□ 0.87
SIX3-201ENST00000260653 EP300Q09472 2414 aaPredicted RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 GNB5O14775 395 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 ENTPD6O75354 484 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 FADS2O95864 444 aaKnown RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 CCR4P51679 360 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 MVKQ03426 396 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 PRKCDQ05655 676 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 ULK3Q6PHR2 472 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 PRSS48Q7RTY5 328 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 TMCO5AQ8N6Q1 288 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 OR13F1Q8NGS4 319 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 BPIFA2Q96DR5 249 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 FKBP14Q9NWM8 211 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 SELENONQ9NZV5 590 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 AKAP7Q9P0M2 348 aaPredicted RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 MAN1A2O60476 641 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 C21orf33P30042 268 aaPredicted RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 PCYT1AP49585 367 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 INSM1Q01101 510 aaPredicted RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 SLC30A6Q6NXT4 461 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 ZNF440Q8IYI8 595 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 TRUB1Q8WWH5 349 aaKnown RBP20.5■□□□□ 0.87
SIX3-201ENST00000260653 MUL1Q969V5 352 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 VMP1Q96GC9 406 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 TUBA1CQ9BQE3 449 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 TSSK6Q9BXA6 273 aa20.5■□□□□ 0.87
SIX3-201ENST00000260653 TRBV11-1A0A0K0K1C0 115 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 C17orf51A8MQB3 221 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 GTPBP1O00178 669 aaKnown RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 ZNF264O43296 627 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 INMTO95050 263 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 COPZ1P61923 177 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 CCDC81Q6ZN84 652 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 FAR1Q8WVX9 515 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 MPP4Q96JB8 637 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 HS6ST2Q96MM7 605 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 KLHDC3Q9BQ90 382 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 POLDIP3Q9BY77 421 aaKnown RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 RSL24D1Q9UHA3 163 aaKnown RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 NXT1Q9UKK6 140 aaKnown RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 CDH10Q9Y6N8 788 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 TLX2O43763 284 aaPredicted RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 ZNF354AO60765 605 aaPredicted RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 LCN1P31025 176 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 PNLIPRP2P54317 469 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 ZNF517Q6ZMY9 492 aaPredicted RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 OSTF1Q92882 214 aa20.49■□□□□ 0.87
SIX3-201ENST00000260653 ZBTB20Q9HC78 741 aaPredicted RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 C19orf25Q9UFG5 118 aaPredicted RBP20.49■□□□□ 0.87
SIX3-201ENST00000260653 SH3D21A4FU49 640 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 UNC119BA6NIH7 251 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 SEC14L2O76054 403 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 SLC26A5P58743 744 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 TMEM201Q5SNT2 666 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 GPR107Q5VW38 600 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 LINC00114Q6XXX2 140 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 MARCH3Q86UD3 253 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 OR4Q3Q8NH05 313 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 WDR36Q8NI36 951 aaKnown RBP20.48■□□□□ 0.87
SIX3-201ENST00000260653 TP53INP1Q96A56 240 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 SH3YL1Q96HL8 342 aaPredicted RBP20.48■□□□□ 0.87
SIX3-201ENST00000260653 C9J4A7 227 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 TTKP33981 857 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 MLLT10P55197 1068 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 FXYD6P3P58550 94 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 SNAPC1Q16533 368 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 DCAF12Q5T6F0 453 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 C3orf49Q96BT1 292 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 SAMD8Q96LT4 415 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 STRADBQ9C0K7 418 aa20.48■□□□□ 0.87
SIX3-201ENST00000260653 EXOSC3Q9NQT5 275 aaKnown RBP20.48■□□□□ 0.87
SIX3-201ENST00000260653 PTRH2Q9Y3E5 179 aaKnown RBP20.48■□□□□ 0.87
SIX3-201ENST00000260653 KNTC1P50748 2209 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 TMEM200CA6NKL6 621 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 C4orf47A7E2U8 309 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 GMFGO60234 142 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 KLF7O75840 302 aaPredicted RBP20.47■□□□□ 0.87
SIX3-201ENST00000260653 CH25HO95992 272 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 UMODP07911 640 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 STSP08842 583 aa20.47■□□□□ 0.87
SIX3-201ENST00000260653 GSTT1P30711 240 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms