RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 GABRG3Q99928 467 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 DPH5Q9H2P9 285 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 TSPY26PQ9H489 355 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 LIN28AQ9H9Z2 209 aaKnown RBP3.93□□□□□ -1.78
TRA2B-201ENST00000259043 S100A14Q9HCY8 104 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 SLC7A10Q9NS82 523 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 DDX28Q9NUL7 540 aaKnown RBP3.93□□□□□ -1.78
TRA2B-201ENST00000259043 COPS7AQ9UBW8 275 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 BLOC1S6Q9UL45 172 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 TMCC3Q9ULS5 477 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 UBQLN1Q9UMX0 589 aaKnown RBP3.93□□□□□ -1.78
TRA2B-201ENST00000259043 ICE1Q9Y2F5 2266 aa3.93□□□□□ -1.78
TRA2B-201ENST00000259043 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 NF1P21359 2839 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 PRRC2CQ9Y520 2896 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 hCG_38984A0A1B0GV85 526 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 IQCMA0A1B0GVH7 501 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 WASH3PC4AMC7 463 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 MLNRO43193 412 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 YEATS4O95619 227 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 EZRP15311 586 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ACADSP16219 412 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 GIFP27352 417 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ADSSP30520 456 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 FEN1P39748 380 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CSNK1EP49674 416 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ZNF131P52739 623 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 HERV-K104P63124 156 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 SLC7A9P82251 487 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CYCSP99999 105 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CDKL1Q00532 357 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 DNAJC3Q13217 504 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 SCGB2A2Q13296 93 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 MEF2DQ14814 521 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 HEPACAMQ14CZ8 416 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 EFTUD2Q15029 972 aaKnown RBP eCLIP3.92□□□□□ -1.789e-15■■□□□ 12
TRA2B-201ENST00000259043 TRADDQ15628 312 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 TAB1Q15750 504 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 C1orf189Q5VU69 101 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 SASS6Q6UVJ0 657 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ABRAXAS1Q6UWZ7 409 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CLEC18BQ6UXF7 455 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CHMP1BQ7LBR1 199 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 C17orf64Q86WR6 236 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CATSPERDQ86XM0 798 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CCDC197Q8NCU1 140 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 MAPK15Q8TD08 544 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 C2orf15Q8WU43 125 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 FGF11Q92914 225 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 RAB39BQ96DA2 213 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 MED8Q96G25 268 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 PRICKLE1Q96MT3 831 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 TSGA13Q96PP4 275 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 LGMNQ99538 433 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 CCSER1Q9C0I3 900 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 DPEP3Q9H4B8 488 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 TMEM231Q9H6L2 316 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ZNF665Q9H7R5 613 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 SPHK2Q9NRA0 654 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 DDX19AQ9NUU7 478 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 SOHLH2Q9NX45 425 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 NUDT4Q9NZJ9 180 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ANKMY1Q9P2S6 941 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 ERVK-18Q9QC07 812 aa3.92□□□□□ -1.78
TRA2B-201ENST00000259043 UXTQ9UBK9 157 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 MRTO4Q9UKD2 239 aaKnown RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 RP1L1Q8IWN7 2480 aaPredicted RBP3.92□□□□□ -1.78
TRA2B-201ENST00000259043 OTOGQ6ZRI0 2925 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 ARHGEF35A5YM69 484 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 CCDC169A6NNP5 214 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 K7EPI3 171 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 LAD1O00515 517 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 CYB561D2O14569 222 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 SLC9A3R1O14745 358 aaPredicted RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 ARPC1BO15143 372 aaKnown RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 SLC16A4O15374 487 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 IDH3BO43837 385 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 TOM1L1O75674 476 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 OAS1P00973 400 aaKnown RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 IGLV3-19P01714 112 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 CLTAP09496 248 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 HIST1H2AGP0C0S8 130 aaPredicted RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 CISD3P0C7P0 127 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 TPBGLP0DKB5 382 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 HLA-FP30511 346 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 PKLRP30613 574 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 ACADVLP49748 655 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 TKTL1P51854 596 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 SLC26A5P58743 744 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 IL9RQ01113 521 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 SMARCB1Q12824 385 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 NME3Q13232 169 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 MSLNQ13421 630 aaPredicted RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 PDIA5Q14554 519 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 FASTKD3Q14CZ7 662 aaKnown RBP3.91□□□□□ -1.78
TRA2B-201ENST00000259043 CAMK4Q16566 473 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 LINC00303Q3SY05 128 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 GPAT3Q53EU6 434 aa3.91□□□□□ -1.78
TRA2B-201ENST00000259043 DDI2Q5TDH0 399 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms