RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ST8SIA1Q92185 356 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 MARVELD3Q96A59 401 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 ZG16BQ96DA0 208 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 KLHDC3Q9BQ90 382 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 THUMPD3Q9BV44 507 aaKnown RBP21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 PINK1Q9BXM7 581 aa21.92■■□□□ 1.1
SDF2L1-201ENST00000248958 ETV2O00321 342 aaPredicted RBP21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 EIF1AYO14602 144 aaKnown RBP21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 ANGPT2O15123 496 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 BCHEP06276 602 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 FCGR2AP12318 317 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 RPS4Y1P22090 263 aaKnown RBP21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 PEX19P40855 299 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 QPRTQ15274 297 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 ZSWIM7Q19AV6 140 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 PRAMEF8Q5VWM4 474 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 PRAMEF7Q5VXH5 474 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 POMZP3Q6PJE2 187 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC38A5Q8WUX1 472 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 NPAS1Q99742 590 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 CACYBPQ9HB71 228 aaKnown RBP21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC24A3Q9HC58 644 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 SLC25A37Q9NYZ2 338 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 KLHL14Q9P2G3 628 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 FOXD3Q9UJU5 478 aaPredicted RBP21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 PRDM4Q9UKN5 801 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 MED12LQ86YW9 2145 aa21.91■■□□□ 1.1
SDF2L1-201ENST00000248958 DSPPQ9NZW4 1301 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 A0A0G2JPF8 293 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 EVPLLA8MZ36 301 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 HNRNPCL2B2RXH8 293 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 HNRNPCL3B7ZW38 293 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 ADAMDEC1O15204 470 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 HNRNPCL1O60812 293 aaKnown RBP21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 HNRNPCL4P0DMR1 293 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 ASCL1P50553 236 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 SELENBP1Q13228 472 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 MAPK11Q15759 364 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 TOMM34Q15785 309 aaPredicted RBP21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 FBXL19-AS1Q494R0 122 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 LILRA2Q8N149 483 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 DPP10Q8N608 796 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 RELL2Q8NC24 303 aaPredicted RBP21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 KLHL15Q96M94 604 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 TREX2Q9BQ50 279 aaPredicted RBP21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 QRSL1Q9H0R6 528 aaKnown RBP21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 A4GALTQ9NPC4 353 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 VAPAQ9P0L0 249 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 SLAMF8Q9P0V8 285 aa21.9■■□□□ 1.1
SDF2L1-201ENST00000248958 TRBV5-3A0A0A0MS03 114 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 H0YC42 278 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 NTN1O95631 604 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 TGM6O95932 706 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 SNRPB2P08579 225 aaKnown RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 NID1P14543 1247 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 EIF1AXP47813 144 aaKnown RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 TPD52P55327 224 aaPredicted RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 PON3Q15166 354 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 CGB2Q6NT52 195 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 MSRB3Q8IXL7 192 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 OR2V1Q8NHB1 315 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 INTS12Q96CB8 462 aaKnown RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 TMEM19Q96HH6 336 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 ADGRG7Q96K78 797 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 PIGMQ9H3S5 423 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 BCL2L10Q9HD36 194 aa21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 NPDC1Q9NQX5 325 aaPredicted RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 MCTS1Q9ULC4 181 aaKnown RBP21.89■■□□□ 1.09
SDF2L1-201ENST00000248958 INTS1Q8N201 2190 aaKnown RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 THBS1P07996 1170 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 IGFBP2P18065 325 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ADSLP30566 484 aaPredicted RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 DLX5P56178 289 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 CTU2Q2VPK5 515 aaKnown RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 LIN52Q52LA3 116 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 MEX3BQ6ZN04 569 aaKnown RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF440Q8IYI8 595 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 OR52P1PQ8NH57 321 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 OR10D3Q8NH80 312 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF563Q8TA94 476 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 FIG4Q92562 907 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF845Q96IR2 970 aaPredicted RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ARMC7Q9H6L4 198 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 TIGARQ9NQ88 270 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 SERINC1Q9NRX5 453 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ACER3Q9NUN7 267 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 ZNF232Q9UNY5 417 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 IFT52Q9Y366 437 aa21.88■■□□□ 1.09
SDF2L1-201ENST00000248958 A0A0J9YW62 118 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 SYT5O00445 386 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 GPX2P18283 190 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 SESN3P58005 492 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 LARS2Q15031 903 aaKnown RBP21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 HBMQ6B0K9 141 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 C3orf33Q6P1S2 294 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 DLEU7Q6UYE1 221 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 DHDDSQ86SQ9 333 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 BBS10Q8TAM1 723 aa21.87■■□□□ 1.09
SDF2L1-201ENST00000248958 RNASE6Q93091 150 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms