RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SYPL1Q16563 259 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 CTU2Q2VPK5 515 aaKnown RBP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 NDUFAF6Q330K2 333 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 GTDC1Q4AE62 458 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 METTL21CQ5VZV1 264 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 C3orf33Q6P1S2 294 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 ANKFN1Q8N957 763 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 GPR119Q8TDV5 335 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 TMEM234Q8WY98 164 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 RNASE6Q93091 150 aaKnown RBP11.49□□□□□ -0.57
VPREB3-201ENST00000248948 KLHL15Q96M94 604 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 NPAS1Q99742 590 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 PINK1Q9BXM7 581 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 PIGMQ9H3S5 423 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 SLC52A3Q9NQ40 469 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 KCNN3Q9UGI6 736 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 PACSIN3Q9UKS6 424 aa11.49□□□□□ -0.57
VPREB3-201ENST00000248948 A0A0G2JND7 137 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 A0A1W2PNV4 684 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 A0A1W2PP18 115 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TMEM247A6NEH6 219 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 H0YC42 278 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TNFSF13O75888 250 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TGM6O95932 706 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 BCHEP06276 602 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 UBTFL6P0CB48 400 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 ETFAP13804 333 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 NID1P14543 1247 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PGCP20142 388 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 CRATP43155 626 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 EIF1AXP47813 144 aaKnown RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 RNF144AP50876 292 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TPD52P55327 224 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 FOXF2Q12947 444 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PON3Q15166 354 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 AGKQ53H12 422 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PDSS1Q5T2R2 415 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 RNF220Q5VTB9 566 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 OLIG3Q7RTU3 272 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 GCNT2Q8N0V5 402 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 OR10D3Q8NH80 312 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 OR2V1Q8NHB1 315 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 RFWD2Q8NHY2 731 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 FBXO27Q8NI29 283 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 FNDC9Q8TBE3 224 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 WDR60Q8WVS4 1066 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 FIG4Q92562 907 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 INTS12Q96CB8 462 aaKnown RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 AURKBQ96GD4 344 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 MCTS1Q9ULC4 181 aaKnown RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 CORO2BQ9UQ03 480 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 PCDHB14Q9Y5E9 798 aa11.48□□□□□ -0.57
VPREB3-201ENST00000248948 ANKRD17O75179 2603 aaKnown RBP11.48□□□□□ -0.57
VPREB3-201ENST00000248948 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 EEF1E1-BLOC1S5C9J1V9 151 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 CLIC1O00299 241 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SYT5O00445 386 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 FAAHO00519 579 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 EEF1E1O43324 174 aaKnown RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 THBS1P07996 1170 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SNRPB2P08579 225 aaKnown RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 PRF1P14222 555 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 NCF2P19878 526 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 PCYT1AP49585 367 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 KCNJ10P78508 379 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 PLAURQ03405 335 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 GUSBP1Q15486 140 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 RGNQ15493 299 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 MAPK11Q15759 364 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 TOMM34Q15785 309 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SGCBQ16585 318 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 ZSWIM7Q19AV6 140 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 LIN52Q52LA3 116 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 MSRB3Q8IXL7 192 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 PEX5LQ8IYB4 626 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 LILRA2Q8N149 483 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SLC25A43Q8WUT9 341 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 SLC38A5Q8WUX1 472 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 THOC1Q96FV9 657 aaKnown RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 THUMPD3Q9BV44 507 aaKnown RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 QRSL1Q9H0R6 528 aaKnown RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 TMEM185BQ9H7F4 350 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 MTHFD2LQ9H903 347 aaPredicted RBP11.47□□□□□ -0.57
VPREB3-201ENST00000248948 ACER3Q9NUN7 267 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 FGFR1OP2Q9NVK5 253 aa11.47□□□□□ -0.57
VPREB3-201ENST00000248948 DNAJB12Q9NXW2 375 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms