RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 RBFOX1Q9NWB1 397 aaKnown RBP23.66■■□□□ 1.38
RAB40C-201ENST00000248139 KCNJ13O60928 360 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 SSX6Q7RTT6 188 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 BRIX1Q8TDN6 353 aaKnown RBP23.66■■□□□ 1.38
RAB40C-201ENST00000248139 KIAA1143Q96AT1 154 aaPredicted RBP23.66■■□□□ 1.38
RAB40C-201ENST00000248139 TEAD3Q99594 435 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 HDHD2Q9H0R4 259 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 PILRAQ9UKJ1 303 aa23.66■■□□□ 1.38
RAB40C-201ENST00000248139 FAM172BPA6NC97 362 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 SGK494L7N484 410 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 RGS9O75916 674 aaPredicted RBP23.65■■□□□ 1.38
RAB40C-201ENST00000248139 AGFG1P52594 562 aaKnown RBP23.65■■□□□ 1.38
RAB40C-201ENST00000248139 SNAP47Q5SQN1 464 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 KIAA1324Q6UXG2 1013 aaKnown RBP23.65■■□□□ 1.38
RAB40C-201ENST00000248139 C4orf36Q96KX1 117 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 KLHL1Q9NR64 748 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 ZMIZ1Q9ULJ6 1067 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 EIF4EP06730 217 aaKnown RBP23.65■■□□□ 1.38
RAB40C-201ENST00000248139 ALAS2P22557 587 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 S100A1P23297 94 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 PEX11GQ96HA9 241 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 TNFRSF13CQ96RJ3 184 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 ASB6Q9NWX5 421 aa23.65■■□□□ 1.38
RAB40C-201ENST00000248139 LRRN3E7EW58 273 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 PRR23D1E9PI22 279 aaPredicted RBP23.64■■□□□ 1.38
RAB40C-201ENST00000248139 PRR23D2P0DMB1 279 aaPredicted RBP23.64■■□□□ 1.38
RAB40C-201ENST00000248139 NFATC4Q14934 902 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 EIPR1Q53HC9 387 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 SAMD12Q8N8I0 201 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 WDR92Q96MX6 357 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 GDF15Q99988 308 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 LRRN3Q9H3W5 708 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 GALNT9Q9HCQ5 603 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 RASD1Q9Y272 281 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 SIGLEC7Q9Y286 467 aa23.64■■□□□ 1.38
RAB40C-201ENST00000248139 TDRD6O60522 2096 aaKnown RBP23.64■■□□□ 1.38
RAB40C-201ENST00000248139 AGR2O95994 175 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 DBIP07108 87 aaKnown RBP23.64■■□□□ 1.37
RAB40C-201ENST00000248139 NGFRP08138 427 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 CELA2BP08218 269 aaPredicted RBP23.64■■□□□ 1.37
RAB40C-201ENST00000248139 FAM157BP0CG42 384 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 ACSM1Q08AH1 577 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 NNATQ16517 81 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 OR4M1Q8NGD0 313 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 FLRT3Q9NZU0 649 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 POLHQ9Y253 713 aa23.64■■□□□ 1.37
RAB40C-201ENST00000248139 A0A0B4J203 849 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 HCN1O60741 890 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 CDC123O75794 336 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-201ENST00000248139 PRKAR1AP10644 381 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 CEACAM19Q7Z692 300 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 GID4Q8IVV7 300 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 LNX2Q8N448 690 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 SLC22A18Q96BI1 424 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 CACNA1IQ9P0X4 2223 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 PRKNO60260 465 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-201ENST00000248139 THBS1P07996 1170 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 EMDP50402 254 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 VSX2P58304 361 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-201ENST00000248139 TMEM44Q2T9K0 475 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 PRICKLE4Q2TBC4 344 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 SLC25A35Q3KQZ1 300 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 SDE2Q6IQ49 451 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 MZT2AQ6P582 158 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 BMPERQ8N8U9 685 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 ZFYVE21Q9BQ24 234 aa23.63■■□□□ 1.37
RAB40C-201ENST00000248139 HRKO00198 91 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 IMPA2O14732 288 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 BMP8BP34820 402 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 KIR2DS3Q14952 304 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 GXYLT1Q4G148 440 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 ABHD13Q7L211 337 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 BMP8AQ7Z5Y6 402 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 OR5J2Q8NH18 312 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 LILRB4Q8NHJ6 448 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 GAS2L1Q99501 681 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-201ENST00000248139 KRCC1Q9NPI7 259 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-201ENST00000248139 ENAMQ9NRM1 1142 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 A0A1W2PRG6 482 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 PLOD3O60568 738 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 SRP9P49458 86 aaKnown RBP23.62■■□□□ 1.37
RAB40C-201ENST00000248139 SNRPD2P62316 118 aaKnown RBP23.62■■□□□ 1.37
RAB40C-201ENST00000248139 ALG11Q2TAA5 492 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 NDUFAF6Q330K2 333 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 CAMKVQ8NCB2 501 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 RERGQ96A58 199 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-201ENST00000248139 MED31Q9Y3C7 131 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 PCDHGB7Q9Y5F8 929 aa23.62■■□□□ 1.37
RAB40C-201ENST00000248139 CYR61O00622 381 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 PYCR1P32322 319 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 MGAT2Q10469 447 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 GALEQ14376 348 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 NDUFA5Q16718 116 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 AMZ1Q400G9 498 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 TRILQ7L0X0 811 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 OR52R1Q8NGF1 315 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 CMC2Q9NRP2 79 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 MCUBQ9NWR8 336 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 A6NCN8 305 aa23.61■■□□□ 1.37
RAB40C-201ENST00000248139 CPNE3O75131 537 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms