RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 EVA1AQ9H8M9 152 aa21.47■■□□□ 1.03
SYNGR3-201ENST00000248121 TMEM27Q9HBJ8 222 aa21.47■■□□□ 1.03
SYNGR3-201ENST00000248121 MEPEQ9NQ76 525 aaPredicted RBP21.47■■□□□ 1.03
SYNGR3-201ENST00000248121 TBC1D23Q9NUY8 699 aa21.47■■□□□ 1.03
SYNGR3-201ENST00000248121 CDH10Q9Y6N8 788 aa21.47■■□□□ 1.03
SYNGR3-201ENST00000248121 PCNX2A6NKB5 2137 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 RFPL3O75679 317 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 BCL10O95999 233 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 ZGLP1P0C6A0 271 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 MLLT10P55197 1068 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 PRKCDQ05655 676 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 NSDHLQ15738 373 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 MEDAGQ5VYS4 303 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 C9orf43Q8TAL5 461 aaPredicted RBP21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 RNF217Q8TC41 542 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 NXF5Q9H1B4 397 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 KPNA4O00629 521 aaPredicted RBP21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 VBP1P61758 197 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 ELAVL1Q15717 326 aaKnown RBP21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 FAM199XQ6PEV8 388 aaPredicted RBP21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 CLDN22Q8N7P3 220 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 LSMEM1Q8N8F7 131 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 NDNFQ8TB73 568 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 CRELD1Q96HD1 420 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 CLCA3PQ9Y6N3 262 aa21.46■■□□□ 1.03
SYNGR3-201ENST00000248121 DMXL1Q9Y485 3027 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 IGLV3-12A0A075B6K2 115 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 IGHV3-20A0A0C4DH32 117 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 CHP2O43745 196 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 CH25HO95992 272 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 IFI30P13284 250 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 PPICP45877 212 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 GAS1P54826 345 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 NCS1P62166 190 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 DCDP81605 110 aaKnown RBP21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 NCF4Q15080 339 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 CSRP2Q16527 193 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC46A3Q7Z3Q1 461 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 ZBTB46Q86UZ6 589 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 ADIPOR1Q96A54 375 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 SAMD8Q96LT4 415 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC46A1Q96NT5 459 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 ZNF426Q9BUY5 554 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 NUDT9Q9BW91 350 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 CLEC2DQ9UHP7 191 aa21.45■■□□□ 1.02
SYNGR3-201ENST00000248121 SERINC4A6NH21 518 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 SURF4O15260 269 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 NGFRP08138 427 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 CCKBRP32239 447 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 TGFBR1P36897 503 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 PSMD4P55036 377 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 MC2RQ01718 297 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 IL11RAQ14626 422 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 PGGHGQ32M88 737 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 KLHL26Q53HC5 615 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 WDR36Q8NI36 951 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC35B4Q969S0 331 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 TMEM80Q96HE8 168 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 ENKD1Q9H0I2 346 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 KRCC1Q9NPI7 259 aaPredicted RBP21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 NCDNQ9UBB6 729 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 MUC6Q6W4X9 2439 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 UNC119BA6NIH7 251 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC22A1O15245 554 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 TBXA2RP21731 343 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 GRK5P34947 590 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 ARMCX4Q5H9R4 360 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 ZNF367Q7RTV3 350 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 CMIPQ8IY22 773 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC38A2Q96QD8 506 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 TRIM2Q9C040 744 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 TGIF2Q9GZN2 237 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 HHATLQ9HCP6 504 aa21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 LSM2Q9Y333 95 aaKnown RBP21.44■■□□□ 1.02
SYNGR3-201ENST00000248121 MEN1O00255 615 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 KIRREL2Q6UWL6 708 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 TMPRSS11FQ6ZWK6 438 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 BRIX1Q8TDN6 353 aaKnown RBP21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 BPIFA2Q96DR5 249 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 OR52D1Q9H346 318 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 CPNE3O75131 537 aaKnown RBP21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 CSTAP01040 98 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 CTBP2P56545 445 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 FNDC7Q5VTL7 733 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 LINC00114Q6XXX2 140 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 HSDL2Q6YN16 418 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 ZNF550Q7Z398 422 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 OR52I1Q8NGK6 324 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 UBQLN3Q9H347 655 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 MED31Q9Y3C7 131 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 LOXL2Q9Y4K0 774 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 B3GALT1Q9Y5Z6 326 aa21.43■■□□□ 1.02
SYNGR3-201ENST00000248121 A0A1W2PNU3 283 aaPredicted RBP21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 KDM4EB2RXH2 506 aaPredicted RBP21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 IDSB3KWA1 339 aa21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 PRODHO43272 600 aa21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 SLC2A10O95528 541 aa21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 IL33O95760 270 aa21.42■■□□□ 1.02
SYNGR3-201ENST00000248121 GADD45AP24522 165 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms