RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 HTR6P50406 440 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 HBG1P69891 147 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 HBG2P69892 147 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ADARB1P78563 741 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 GPLD1P80108 840 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SP3Q02447 781 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ARHGAP40Q5TG30 622 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 RPL3LQ92901 407 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 SLC35B4Q969S0 331 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SPO11Q9Y5K1 396 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 B3GALT1Q9Y5Z6 326 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 FTCDNL1E5RQL4 147 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ATP1B1P05026 303 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 CR2P20023 1033 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PTPRCAPQ14761 206 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PLPP4Q5VZY2 271 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 NADSYN1Q6IA69 706 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 OR5M3Q8NGP4 307 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 BLACEA4D250 179 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 RAB28P51157 221 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PLPP5Q8NEB5 264 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 TRIB2Q92519 343 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SPTSSAQ969W0 71 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZDHHC12Q96GR4 267 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 CPPED1Q9BRF8 314 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 KCNK12Q9HB15 430 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 F5P12259 2224 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 TMEM129A0AVI4 362 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 CD300LBA8K4G0 201 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ALDOCP09972 364 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 WDR88Q6ZMY6 472 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 BPIFB2Q8N4F0 458 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 OR5D14Q8NGL3 314 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 FIZ1Q96SL8 496 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 DDX31Q9H8H2 851 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 F10P00742 488 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PTHP01270 115 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SERPINA5P05154 406 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 CTSOP43234 321 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 DAP3P51398 398 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 CLDN6P56747 220 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 SLC2A12Q8TD20 617 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF566Q969W8 418 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF582Q96NG8 517 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 OR2T1O43869 369 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 H3F3CQ6NXT2 135 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PODNL1Q6PEZ8 512 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF808Q8N4W9 903 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 SHISA4Q96DD7 197 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 YARS2Q9Y2Z4 477 aaKnown RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 RNF212BA8MTL3 300 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 BRINP1O60477 761 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ZNF280AP59817 542 aaPredicted RBP7.73□□□□□ -1.17
APOB-201ENST00000233242 CRTC1Q6UUV9 634 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 PLEKHJ1Q9NW61 149 aa7.73□□□□□ -1.17
APOB-201ENST00000233242 ARAFP10398 606 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 RPS25P62851 125 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 MSMO1Q15800 293 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 TP53I3Q53FA7 332 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 RDH10Q8IZV5 341 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 DCLRE1CQ96SD1 692 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 RNF39Q9H2S5 420 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 IER3IP1Q9Y5U9 82 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 C2orf78A6NCI8 922 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZNF140P52738 457 aaPredicted RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 TMUB2Q71RG4 321 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 TCTE3Q8IZS6 198 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 DNAAF1Q8NEP3 725 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZNF384Q8TF68 577 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 SLAMF9Q96A28 289 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZNF578Q96N58 590 aaPredicted RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 ALOXE3Q9BYJ1 711 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 C20orf85Q9H1P6 137 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ANKRD19PQ9H560 264 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 HEMK1Q9Y5R4 338 aaPredicted RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 PEAK1Q9H792 1746 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 CABIN1Q9Y6J0 2220 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 TMEM225BP0DP42 221 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZNF43P17038 809 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 RPL17P18621 184 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 HTR3AP46098 478 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 POU3F4P49335 361 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZMYND19Q96E35 227 aaPredicted RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 OCSTAMPQ9BR26 566 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 CERS4Q9HA82 394 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 SCPEP1Q9HB40 452 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 GNG13Q9P2W3 67 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 CFAP20Q9Y6A4 193 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 CCL23P55773 120 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 PLCXD2Q0VAA5 305 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ZC3H14Q6PJT7 736 aaKnown RBP7.72□□□□□ -1.17
APOB-201ENST00000233242 SIAH3Q8IW03 269 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 SFXN2Q96NB2 322 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 PGAP2Q9UHJ9 254 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 CPED1A4D0V7 1026 aa7.72□□□□□ -1.17
APOB-201ENST00000233242 ANTXRLA6NF34 631 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms