RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 HMGN3Q15651 99 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 SLC18B1Q6NT16 456 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 C17orf107Q6ZR85 190 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 CBARPQ8N350 705 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-201ENST00000229330 TDP1Q9NUW8 608 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF223Q9UK11 482 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-201ENST00000229330 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 LTBQ06643 244 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 GPR157Q5UAW9 335 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 USP51Q70EK9 711 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM200AQ86VY9 491 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 NLRP8Q86W28 1048 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 DZANK1Q9NVP4 752 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 ITGB4P16144 1822 aa12.96□□□□□ -0.33
HCFC2-201ENST00000229330 A0A0A6YYJ9 748 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 B4GALT2O60909 372 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 HENMT1Q5T8I9 393 aaKnown RBP12.96□□□□□ -0.34
HCFC2-201ENST00000229330 SCD5Q86SK9 330 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 GPAT4Q86UL3 456 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF679Q8IYX0 411 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 RNF175Q8N4F7 328 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 LGALS14Q8TCE9 139 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 SPNS1Q9H2V7 528 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 ASB6Q9NWX5 421 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 BTAF1O14981 1849 aa12.96□□□□□ -0.34
HCFC2-201ENST00000229330 TMEM82A0PJX8 343 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 D6RAR5 112 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 MFSD13AQ14CX5 517 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 MORN1Q5T089 497 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ARHGAP40Q5TG30 622 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 XAF1Q6GPH4 301 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 BCDIN3DQ7Z5W3 292 aaKnown RBP12.95□□□□□ -0.34
HCFC2-201ENST00000229330 RNF141Q8WVD5 230 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SEC22CQ9BRL7 303 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SLIRPQ9GZT3 109 aaKnown RBP12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 MYEF2Q9P2K5 600 aaKnown RBP12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF225Q9UK10 706 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 USP3Q9Y6I4 520 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PTGESO14684 152 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ADH5P11766 374 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 NR2C1P13056 603 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SRP9P49458 86 aaKnown RBP12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PPT1P50897 306 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GGTA1PQ4G0N0 100 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 HORMAD2Q8N7B1 307 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF283Q8N7M2 679 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GATSQ8NAP1 163 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SMARCD2Q92925 531 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SDHAF3Q9NRP4 125 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PRSS21Q9Y6M0 314 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 RDH16O75452 317 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 STC2O76061 302 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GPX2P18283 190 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 IL1RNP18510 177 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 RASGRP3Q8IV61 690 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 NEIL2Q969S2 332 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF860A6NHJ4 632 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 KNG1P01042 644 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 CYBAP13498 195 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 CCR9P51686 369 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PER3P56645 1201 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 CHRNEQ04844 493 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ZNF805Q5CZA5 627 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GPR155Q7Z3F1 870 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ASPGQ86U10 573 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 ABHD4Q8TB40 342 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 GABARAPL3Q9BY60 117 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 TLR9Q9NR96 1032 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 TSPAN11A1L157 253 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 TEKQ02763 1124 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 HYAL2Q12891 473 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 PPA1Q15181 289 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 NAXEQ8NCW5 288 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 SFXN5Q8TD22 340 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 IER3IP1Q9Y5U9 82 aa12.95□□□□□ -0.34
HCFC2-201ENST00000229330 RAD51DO75771 328 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 GIPP09681 153 aaPredicted RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 TEAD2Q15562 447 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 RPL22L1Q6P5R6 122 aaKnown RBP12.94□□□□□ -0.34
HCFC2-201ENST00000229330 BPIFB2Q8N4F0 458 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 KLHL42Q9P2K6 505 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 GYPBP06028 91 aa12.94□□□□□ -0.34
HCFC2-201ENST00000229330 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms