RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 SLCO1B7G3V0H7 640 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 KIAA0513O60268 411 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 SS18L1O75177 396 aaPredicted RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 AGR2O95994 175 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 CSTAP01040 98 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 HRGP04196 525 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 PGRP06401 933 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 CD1EP15812 388 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ADH6P28332 368 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 UGT2B10P36537 528 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 CDKN2CP42773 168 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 SKP2Q13309 424 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 TYW3Q6IPR3 259 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 SPNS3Q6ZMD2 512 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZNF621Q6ZSS3 439 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 RNF130Q86XS8 419 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 PNPT1Q8TCS8 783 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 NINJ1Q92982 152 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ARL8AQ96BM9 186 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ROPN1LQ96C74 230 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZC3HAV1LQ96H79 300 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 LAT2Q9GZY6 243 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 QRSL1Q9H0R6 528 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ELOVL5Q9NYP7 299 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 WDR45Q9Y484 360 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 PRAMEF27A3QJZ7 478 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 GJE1A6NN92 205 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 C16orf97H3BN30 126 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 HMGN4O00479 90 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 BCAS1O75363 584 aaPredicted RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 HPCAP84074 193 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZNF239Q16600 458 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 FRRS1Q6ZNA5 592 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 EIF3MQ7L2H7 374 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ABHD3Q8WU67 409 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZNF75CPQ92670 426 aaPredicted RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 REXO5Q96IC2 774 aaKnown RBP12.72□□□□□ -0.37
GPN3-201ENST00000228827 MRGPRX4Q96LA9 322 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 TIGARQ9NQ88 270 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
GPN3-201ENST00000228827 IGHV3-15A0A0B4J1V0 119 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 A0A1W2PNR3 127 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 A0A1W2PPR1 153 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 SLC22A3O75751 556 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 H6PDO95479 791 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 NTN1O95631 604 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 AGTR1P30556 359 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 SLC7A1P30825 629 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 RYKP34925 604 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 CHRNEQ04844 493 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 SELENBP1Q13228 472 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 SYPL1Q16563 259 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.38
GPN3-201ENST00000228827 SLC25A53Q5H9E4 307 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 COX20Q5RI15 118 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 AGBL2Q5U5Z8 902 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 PAMR1Q6UXH9 720 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 DNAJC14Q6Y2X3 702 aaPredicted RBP12.71□□□□□ -0.38
GPN3-201ENST00000228827 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 ANKFN1Q8N957 763 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 PIWIL2Q8TC59 973 aaKnown RBP12.71□□□□□ -0.38
GPN3-201ENST00000228827 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.38
GPN3-201ENST00000228827 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 MAELQ96JY0 434 aaKnown RBP12.71□□□□□ -0.38
GPN3-201ENST00000228827 OR52B2Q96RD2 323 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 COQ10BQ9H8M1 238 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 PLEKHF2Q9H8W4 249 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 POLE3Q9NRF9 147 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 GLRX2Q9NS18 164 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 EDARQ9UNE0 448 aa12.71□□□□□ -0.38
GPN3-201ENST00000228827 CLDN24A6NM45 220 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 RFXANKO14593 260 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 SIAH2O43255 324 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 DIAPH2O60879 1101 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 GOSR1O95249 250 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 RAF1P04049 648 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 IDO1P14902 403 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 PGCP20142 388 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 PGM1P36871 562 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 SESN3P58005 492 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 MERTKQ12866 999 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 KEAP1Q14145 624 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 FCRLAQ7L513 359 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 GLB1L3Q8NCI6 653 aaPredicted RBP12.7□□□□□ -0.38
GPN3-201ENST00000228827 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 OR5B2Q96R09 309 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 FOXC2Q99958 501 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 ZNF226Q9NYT6 803 aa12.7□□□□□ -0.38
GPN3-201ENST00000228827 CELSR1Q9NYQ6 3014 aa12.69□□□□□ -0.38
GPN3-201ENST00000228827 KLF11O14901 512 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms