RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 C1orf94Q6P1W5 598 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 NRSN1Q8IZ57 195 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CPXM2Q8N436 756 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF566Q969W8 418 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 PDXPQ96GD0 296 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 TAPBPLQ9BX59 468 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 UBQLN3Q9H347 655 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 SEMA4GQ9NTN9 838 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 KLHL9Q9P2J3 617 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 MRTO4Q9UKD2 239 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 UTRNP46939 3433 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 H7C2Y5 167 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 HMGN4O00479 90 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 LCMT2O60294 686 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 RPS27P42677 84 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 KIAA1024LP59773 190 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 OR1Q1Q15612 314 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 USP53Q70EK8 1073 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 LRRC28Q86X40 367 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CLDN22Q8N7P3 220 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF511Q8NB15 262 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 TRMT2BQ96GJ1 504 aaKnown RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 CHST8Q9H2A9 424 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-201ENST00000226574 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
NFKB1-201ENST00000226574 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF878C9JN71 531 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.35
NFKB1-201ENST00000226574 HLA-DMAP28067 261 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 PRKXP51817 358 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 ACTC1P68032 377 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 ACTA1P68133 377 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 COL28A1Q2UY09 1125 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 OR5M10Q6IEU7 315 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 FAAP20Q6NZ36 180 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 MEPCEQ7L2J0 689 aaKnown RBP12.83□□□□□ -0.35
NFKB1-201ENST00000226574 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 ZG16BQ96DA0 208 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 FBXL2Q9UKC9 423 aa12.83□□□□□ -0.35
NFKB1-201ENST00000226574 COL4A5P29400 1685 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 RHPN2P1A8MT19 583 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 KIAA0355O15063 1070 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 AGPAT2O15120 278 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 TCRBP04435 133 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SLC7A9P82251 487 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 MOAP1Q96BY2 351 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 METTL2AQ96IZ6 378 aaKnown RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 C1QTNF2Q9BXJ5 285 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CST11Q9H112 138 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 PRTFDC1Q9NRG1 225 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 DNMT3BQ9UBC3 853 aaKnown RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SLC23A2Q9UGH3 650 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SPTA1P02549 2419 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 PRAMEF4O60810 478 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 VASPP50552 380 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 MRPL58Q14197 206 aaKnown RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 GPR176Q14439 515 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 C3orf38Q5JPI3 329 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 PRAMEF9Q5VWM5 478 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SLC22A10Q63ZE4 541 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 RFPL4BQ6ZWI9 263 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SYNPRQ8TBG9 265 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 LGALS14Q8TCE9 139 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CDCA4Q9BXL8 241 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 GABARAPL3Q9BY60 117 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 PLA2G12AQ9BZM1 189 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 NOX3Q9HBY0 568 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 PLCXD1Q9NUJ7 323 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SCP2D1Q9UJQ7 156 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 HOXC11O43248 304 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 NDUFB2O95178 105 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CD160O95971 181 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SFTPBP07988 381 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 HBQ1P09105 142 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 ATP5A1P25705 553 aaKnown RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 MMP12P39900 470 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 GDNFP39905 211 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CCSAPQ6IQ19 270 aaPredicted RBP12.83□□□□□ -0.36
NFKB1-201ENST00000226574 ARHGAP11AQ6P4F7 1023 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 MS4A4EQ96PG1 132 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 SLC6A17Q9H1V8 727 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
NFKB1-201ENST00000226574 CASC3O15234 703 aaKnown RBP12.82□□□□□ -0.36
NFKB1-201ENST00000226574 CLEC3AO75596 197 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms