RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 MBD3L2Q8NHZ7 208 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 ZNF845Q96IR2 970 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 ELAC2Q9BQ52 826 aaKnown RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
LSM5-201ENST00000223084 PINK1Q9BXM7 581 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 FAM107BQ9H098 131 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 RAD21L1Q9H4I0 556 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 A4GALTQ9NPC4 353 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 ARMCX1Q9P291 453 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 CLCF1Q9UBD9 225 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 SLC35A3Q9Y2D2 325 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 HCFC1P51610 2035 aa11.42□□□□□ -0.58
LSM5-201ENST00000223084 DSPPQ9NZW4 1301 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 HSPB2A8KAH6 182 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 EIF1AYO14602 144 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 ADAM11O75078 769 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 BMP2P12643 396 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 IL7RP16871 459 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 PPIBP23284 216 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 SFTPDP35247 375 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 EIF1P41567 113 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 SESN3P58005 492 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 MTPNP58546 118 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 RAC1P63000 192 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 FOXF2Q12947 444 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 CAPRIN1Q14444 709 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 HSPB2Q16082 182 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 GCNT6Q5T4J0 391 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 MRPL2Q5T653 305 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 GRAMD2AQ8IUY3 354 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 PEX5LQ8IYB4 626 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 GCNT2Q8N0V5 402 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 DPP10Q8N608 796 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 OR52P1PQ8NH57 321 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 NFKBIDQ8NI38 313 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 TSPEARQ8WU66 669 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 WDR60Q8WVS4 1066 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 FIG4Q92562 907 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 WNT2BQ93097 391 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 INTS12Q96CB8 462 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 UCN2Q96RP3 112 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 CGREF1Q99674 301 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 TREX2Q9BQ50 279 aaPredicted RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 KCNJ16Q9NPI9 418 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 RLIMQ9NVW2 624 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 THUMPD1Q9NXG2 353 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 DNAJB12Q9NXW2 375 aaKnown RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 CALML5Q9NZT1 146 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 GPC6Q9Y625 555 aaPredicted RBP11.41□□□□□ -0.58
LSM5-201ENST00000223084 NOTCH2Q04721 2471 aa11.41□□□□□ -0.58
LSM5-201ENST00000223084 A0A0G2JPF8 293 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 A0A0J9YW62 118 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 LOC100653049A0A140TA62 436 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 TMEM247A6NEH6 219 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 SLC22A20A6NK97 555 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 EVPLLA8MZ36 301 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 HNRNPCL2B2RXH8 293 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 HNRNPCL3B7ZW38 293 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 AP3D1O14617 1153 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 TNFSF11O14788 317 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 HNRNPCL1O60812 293 aaKnown RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 DNAJA2O60884 412 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 KRT34O76011 436 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 NTN1O95631 604 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 DBIP07108 87 aaKnown RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 HNRNPCL4P0DMR1 293 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 ARAFP10398 606 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 NID1P14543 1247 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 GPX2P18283 190 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 BMP5P22003 454 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 EIF1AXP47813 144 aaKnown RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 SLC6A8P48029 635 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 EEFSECP57772 596 aaKnown RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 GNGT1P63211 74 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 PON3Q15166 354 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 CTU2Q2VPK5 515 aaKnown RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 POMZP3Q6PJE2 187 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 ZNF836Q6ZNA1 936 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 P4HA3Q7Z4N8 544 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 SNX32Q86XE0 403 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 LILRA2Q8N149 483 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 METTL25Q8N6Q8 603 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 OR10D3Q8NH80 312 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 ADGRG7Q96K78 797 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 MRGPRX4Q96LA9 322 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 ANKRD27Q96NW4 1050 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.58
LSM5-201ENST00000223084 GMEB1Q9Y692 573 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 CAPN7Q9Y6W3 813 aa11.4□□□□□ -0.58
LSM5-201ENST00000223084 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 C5orf58C9J3I9 102 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 CXCL13O43927 109 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 RCBTB2O95199 551 aa11.39□□□□□ -0.59
LSM5-201ENST00000223084 PGM3O95394 542 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms