RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CACNG6Q9BXT2 260 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 CRYBG1Q9Y4K1 1723 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 PCDHGA7Q9Y5G6 932 aa17.74■□□□□ 0.43
SMPD3-201ENST00000219334 I3L521 148 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CYB5BO43169 146 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ATP1B3P54709 279 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 PAPD4Q6PIY7 484 aaKnown RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 PARM1Q6UWI2 310 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF695Q8IW36 515 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ELSPBP1Q96BH3 223 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SPIN2AQ99865 258 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SPIN2BQ9BPZ2 258 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 TIMM8BQ9Y5J9 83 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SLC22A7Q9Y694 548 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SOCS7O14512 581 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 BMP1P13497 986 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CD34P28906 385 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 OR1Q1Q15612 314 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SMAD2Q15796 467 aaKnown RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF181Q2M3W8 571 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 GPR157Q5UAW9 335 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM150AQ86TG1 271 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 MARVELD2Q8N4S9 558 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 TEX19Q8NA77 164 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 OR11L1Q8NGX0 322 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 HHLA2Q9UM44 414 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 FAM155AB1AL88 458 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 KNG1P01042 644 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CFAP77Q6ZQR2 320 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 AAED1Q7RTV5 226 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 METTL4Q8N3J2 472 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ADAMTS16Q8TE57 1224 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CXXC1Q9P0U4 656 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 DOT1LQ8TEK3 1739 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CHD2O14647 1828 aaKnown RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 ATF4P18848 351 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 CNTN4Q8IWV2 1026 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 IL17RDQ8NFM7 739 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 OR52D1Q9H346 318 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 SYNPO2LQ9H987 977 aa17.73■□□□□ 0.43
SMPD3-201ENST00000219334 DHCR7Q9UBM7 475 aaKnown RBP17.73■□□□□ 0.43
SMPD3-201ENST00000219334 A0A087WUU8 490 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 KLRC4-KLRK1H3BQV0 150 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 ARNTLO00327 626 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 GJB3O75712 270 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 GPR18Q14330 331 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 NKPD1Q17RQ9 610 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 ENTPD8Q5MY95 495 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 NKAIN2Q5VXU1 208 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 VRK2Q86Y07 508 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 SEMA6CQ9H3T2 930 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 DCAF13Q9NV06 445 aaKnown RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 TESQ9UGI8 421 aaKnown RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 SSX5O60225 188 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 MT-CO2P00403 227 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 S100PP25815 95 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 IRS1P35568 1242 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 SFRP4Q6FHJ7 346 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 DPY19L4Q7Z388 723 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 OR13H1Q8NG92 308 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 OR4K15Q8NH41 348 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 APMAPQ9HDC9 416 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 SLC6A20Q9NP91 592 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 CNOT11Q9UKZ1 510 aaKnown RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 ESCO2Q56NI9 601 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 VHLLQ6RSH7 139 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 HHLA1C9JL84 531 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 BMP2P12643 396 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 DNASE1P24855 282 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 MMP12P39900 470 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 EIF2DP41214 584 aaKnown RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 SQSTM1Q13501 440 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 PROX2Q3B8N5 592 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 ATOH8Q96SQ7 321 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 VRK1Q99986 396 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 MRI1Q9BV20 369 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 VN1R3Q9BXE9 311 aa17.72■□□□□ 0.43
SMPD3-201ENST00000219334 RANBP3Q9H6Z4 567 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-201ENST00000219334 TBRG1Q3YBR2 411 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 SLC6A19Q695T7 634 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 DUSP19Q8WTR2 217 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 ZNF597Q96LX8 424 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 NUDT22Q9BRQ3 303 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 PPP1R14DQ9NXH3 145 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 HAO2Q9NYQ3 351 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TRAV27A0A087WT01 109 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TRAPPC2LH3BP13 241 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 ETV4P43268 484 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 GABRA2P47869 451 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 SLC22A10Q63ZE4 541 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 CTRCQ99895 268 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 ERVK13-1Q9NX77 482 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 NOSIPQ9Y314 301 aaKnown RBP17.71■□□□□ 0.43
SMPD3-201ENST00000219334 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-201ENST00000219334 DDAH2O95865 285 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 SEC61A1P61619 476 aaKnown RBP17.71■□□□□ 0.43
SMPD3-201ENST00000219334 TMEM52BQ4KMG9 183 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 C5orf46Q6UWT4 87 aa17.71■□□□□ 0.43
SMPD3-201ENST00000219334 MOB3CQ70IA8 216 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms