RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ARSKQ6UWY0 536 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 YRDCQ86U90 279 aaKnown RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 ZNF843Q8N446 348 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 GPR119Q8TDV5 335 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 POP5Q969H6 163 aaKnown RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 LRGUKQ96M69 825 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 SFXN2Q96NB2 322 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 STOML1Q9UBI4 398 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 TESQ9UGI8 421 aaKnown RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 FAAHO00519 579 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 TPST1O60507 370 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 PRB1P04280 392 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CELA3AP09093 270 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CD247P20963 164 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 MST1P26927 711 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 MSX2P35548 267 aaPredicted RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 RBPJQ06330 500 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 QPRTQ15274 297 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 PLPPR5Q32ZL2 321 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 WIPI1Q5MNZ9 446 aaPredicted RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CBLL1Q75N03 491 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 YTHDF3Q7Z739 585 aaKnown RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 DHFR2Q86XF0 187 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 ULK2Q8IYT8 1036 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CFAP46Q8IYW2 2715 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CLPTM1LQ96KA5 538 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 CADM1Q9BY67 442 aaKnown RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 PCDHAC1Q9H158 963 aa18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 RPH3AQ9Y2J0 694 aaPredicted RBP18.32■□□□□ 0.52
RHBDD3-201ENST00000216085 C7orf72A4D263 438 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 BCAS1O75363 584 aaPredicted RBP18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 GKN3PP0CG01 181 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 GP1BBP13224 206 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 ADH6P28332 368 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 HTR3AP46098 478 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 CRYBA2P53672 197 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 FKBP9P1Q75LS8 142 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 TRILQ7L0X0 811 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 NEIL3Q8TAT5 605 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 MRGPRX4Q96LA9 322 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 SLC6A15Q9H2J7 730 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 SH3GLB1Q9Y371 365 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 CHST2Q9Y4C5 530 aa18.31■□□□□ 0.52
RHBDD3-201ENST00000216085 B4DXG7 233 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 AP3D1O14617 1153 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 TCEA1P23193 301 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 IDH2P48735 452 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 TDGF1P3P51864 188 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 PLAURQ03405 335 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 TRAP1Q12931 704 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 GFRALQ6UXV0 394 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 GTPBP8Q8N3Z3 284 aaPredicted RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 GPR32P1Q8NGA4 272 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 OR52E4Q8NGH9 312 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 SARAFQ96BY9 339 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ARHGDIGQ99819 225 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ZNF559Q9BR84 538 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 PLSCR2Q9NRY7 297 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 DCAF13Q9NV06 445 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 RPS6KB2Q9UBS0 482 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 SMG1Q96Q15 3661 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 AQP7O14520 342 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 FRS3O43559 492 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ZIC3O60481 467 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ACTL6AO96019 429 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 PRKCAP17252 672 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 CHMP24386 653 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 C19orf57Q0VDD7 668 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 NRF1Q16656 503 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 IFI44LQ53G44 452 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 WBP2NLQ6ICG8 309 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 ENPP6Q6UWR7 440 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 GRINAQ7Z429 371 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 CADM2Q8N3J6 435 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 VANGL1Q8TAA9 524 aaPredicted RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 GEMIN6Q8WXD5 167 aaKnown RBP18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 TRIM2Q9C040 744 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 SELENONQ9NZV5 590 aa18.3■□□□□ 0.52
RHBDD3-201ENST00000216085 A0A1B0GVC2 190 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 OR14I1A6ND48 311 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 FMO6PO60774 539 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 ELK4P28324 431 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 SLC1A3P43003 542 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 KCNC4Q03721 635 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 TLE1Q04724 770 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 FOXF1Q12946 379 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 LCN8Q6JVE9 175 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 PGM2L1Q6PCE3 622 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 ST6GALNAC3Q8NDV1 305 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 HSH2DQ96JZ2 352 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 TMEM27Q9HBJ8 222 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 SERINC1Q9NRX5 453 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 ACER3Q9NUN7 267 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 LIPGQ9Y5X9 500 aa18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 SPIN1Q9Y657 262 aaPredicted RBP18.29■□□□□ 0.52
RHBDD3-201ENST00000216085 RP1L1Q8IWN7 2480 aaPredicted RBP18.28■□□□□ 0.52
RHBDD3-201ENST00000216085 M0R3H8 397 aa18.28■□□□□ 0.52
RHBDD3-201ENST00000216085 C1QL1O75973 258 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms