RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TBPL2Q6SJ96 375 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 CBLL1Q75N03 491 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SLC2A13Q96QE2 648 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 INTS14Q96SY0 518 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TSPAN10Q9H1Z9 355 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 HSFX1Q9UBD0 423 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 LIPT1Q9Y234 373 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PCDHGA5Q9Y5G8 931 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SLC16A6O15403 523 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 YKT6O15498 198 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TAGLN2P37802 199 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 OR2B8PP59922 312 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PLA2G7Q13093 441 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 CATSPEREQ5SY80 951 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 AWAT2Q6E213 333 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 CYB561A3Q8NBI2 242 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 ECHDC3Q96DC8 303 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 ZMYND19Q96E35 227 aaPredicted RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 C4orf36Q96KX1 117 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 HS6ST2Q96MM7 605 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TGM7Q96PF1 710 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TXN2Q99757 166 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SLC6A20Q9NP91 592 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SPHK1Q9NYA1 384 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 KCNS2Q9ULS6 477 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 WASF3Q9UPY6 502 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 B4DXG7 233 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PPP6CO00743 305 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 P2RX6O15547 441 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 DIRAS3O95661 229 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PPP1R3DO95685 299 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PRDX3P30048 256 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 PSMB10P40306 273 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 DOC2AQ14183 400 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 EIF2B1Q14232 305 aaKnown RBP9.83□□□□□ -0.84
VCL-201ENST00000211998 DUSP7Q16829 419 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PRRT3Q5FWE3 981 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 MLIPQ5VWP3 458 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 PSAPL1Q6NUJ1 521 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 UMODL1-AS1Q8N2C9 162 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 OR4F15Q8NGB8 312 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 OR4C15Q8NGM1 316 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TMEM163Q8TC26 289 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 TOMM40LQ969M1 308 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 RADILQ96JH8 1075 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 SFXN1Q9H9B4 322 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 ZNF175Q9Y473 711 aa9.83□□□□□ -0.84
VCL-201ENST00000211998 COCHO43405 550 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 CLEC3AO75596 197 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 ARSAP15289 507 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 CNR1P21554 472 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 PER3P56645 1201 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 HSD11B2P80365 405 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 BPIFB2Q8N4F0 458 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 IL17RCQ8NAC3 791 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TM9SF4Q92544 642 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 YIPF5Q969M3 257 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TMEM68Q96MH6 324 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 RBP7Q96R05 134 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SPHK2Q9NRA0 654 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TESQ9UGI8 421 aaKnown RBP9.82□□□□□ -0.84
VCL-201ENST00000211998 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 HCRTR2O43614 444 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 LILRB5O75023 590 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 HOXB5P09067 269 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 F3P13726 295 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 AHRP35869 848 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SOX9P48436 509 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 GIPRP48546 466 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SRP9P49458 86 aaKnown RBP9.82□□□□□ -0.84
VCL-201ENST00000211998 NKX3-2P78367 333 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 GPR176Q14439 515 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SLC5A12Q1EHB4 618 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 ZBTB37Q5TC79 503 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TECPR1Q7Z6L1 1165 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 ZNF417Q8TAU3 575 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 PGAP2Q9UHJ9 254 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 KLF15Q9UIH9 416 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SLC22A23A1A5C7 686 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 IMPA2O14732 288 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 B4GALT2O60909 372 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 CSO75390 466 aaKnown RBP9.82□□□□□ -0.84
VCL-201ENST00000211998 UBL3O95164 117 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 C1GALT1C1LP0DN25 315 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 HIST2H3AQ71DI3 136 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SERINC5Q86VE9 423 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TP53INP2Q8IXH6 220 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 NTMT1Q9BV86 223 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 DKKL1Q9UK85 242 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 A0A0A6YYJ9 748 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 EMC8O43402 210 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TGOLN2O43493 480 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 DFFBO76075 338 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 RAB40ALP0C0E4 278 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 NME1P15531 152 aaKnown RBP9.82□□□□□ -0.84
VCL-201ENST00000211998 ZNF44P15621 663 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TGFBR1P36897 503 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 SEC61A1P61619 476 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms