RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PRTFDC1Q9NRG1 225 aa15.77■□□□□ 0.12
PHGDH-211ENST00000641213 SIGLEC7Q9Y286 467 aa15.77■□□□□ 0.12
PHGDH-211ENST00000641213 MRPS33Q9Y291 106 aaKnown RBP15.77■□□□□ 0.12
PHGDH-211ENST00000641213 TRAPPC4Q9Y296 219 aa15.77■□□□□ 0.12
PHGDH-211ENST00000641213 CLDN16Q9Y5I7 305 aa15.77■□□□□ 0.12
PHGDH-211ENST00000641213 OR2W5A6NFC9 320 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 CHP2O43745 196 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 RFPL3O75679 317 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 PTTG1O95997 202 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 NME1P15531 152 aaKnown RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 SDC2P34741 201 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 BMP8BP34820 402 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 ACAA2P42765 397 aaKnown RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 ACSM1Q08AH1 577 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 HNRNPA0Q13151 305 aaKnown RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF791Q3KP31 576 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 RPL13AP3Q6NVV1 102 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 NIPAL3Q6P499 406 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 CD200R1LQ6Q8B3 271 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 B3GLCTQ6Y288 498 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 BMP8AQ7Z5Y6 402 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 LMX1AQ8TE12 382 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 ABHD8Q96I13 439 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 WDFY2Q96P53 400 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 MED18Q9BUE0 208 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 CCDC32Q9BV29 185 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 DNAJB12Q9NXW2 375 aaKnown RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 PLEKHB1Q9UF11 243 aaPredicted RBP15.77■□□□□ 0.11
PHGDH-211ENST00000641213 V9GYH0 126 aa15.77■□□□□ 0.11
PHGDH-211ENST00000641213 A0A1B0GWA3 101 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 A0A1W2PR77 199 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 BLACEA4D250 179 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 NSA2O95478 260 aaKnown RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SAGP10523 405 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SPNP16150 400 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 CD27P26842 260 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 CD38P28907 300 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 FGF9P31371 208 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 GABRA4P48169 554 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SLC9A3P48764 834 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 FZD5Q13467 585 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 FAM53BQ14153 422 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF267Q14586 743 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 NPSR1Q6W5P4 371 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 MEPCEQ7L2J0 689 aaKnown RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 GKN2Q86XP6 184 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SYT14Q8NB59 555 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 OR51G2Q8NGK0 314 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 OR52N1Q8NH53 320 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SPRYD4Q8WW59 207 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 NACC2Q96BF6 587 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 PHF7Q9BWX1 381 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-211ENST00000641213 HCAR1Q9BXC0 346 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 UCK1Q9HA47 277 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 CMAHPQ9Y471 501 aa15.76■□□□□ 0.11
PHGDH-211ENST00000641213 ZC3H12DA2A288 527 aaKnown RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 SLC35F4A4IF30 521 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 AKAP8O43823 692 aaKnown RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 PTP4A3O75365 173 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 DLGAP3O95886 979 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 COPZ1P61923 177 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 FOXK2Q01167 660 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TDGQ13569 410 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TMPRSS11AQ6ZMR5 421 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 RCBTB1Q8NDN9 531 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 OR6C4Q8NGE1 309 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF285Q96NJ3 590 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 DGAT2Q96PD7 388 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 SLC38A3Q99624 504 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 IFT27Q9BW83 186 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 C14orf119Q9NWQ9 140 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 CA14Q9ULX7 337 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 GSTK1Q9Y2Q3 226 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 MN1Q10571 1320 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TRAV27A0A087WT01 109 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TRDV1A0A1B0GX56 115 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 LILRA5A6NI73 299 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 METTL12A8MUP2 240 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 CLDN4O14493 209 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 MAOAP21397 527 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 MAOBP27338 520 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 GPR3P46089 330 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 COL13A1Q5TAT6 717 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 PRPF38BQ5VTL8 546 aaKnown RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF322Q6U7Q0 402 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 ZNF426Q9BUY5 554 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 KATNB1Q9BVA0 655 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TRIM2Q9C040 744 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 TTYH1Q9H313 450 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-211ENST00000641213 CMC2Q9NRP2 79 aa15.75■□□□□ 0.11
PHGDH-211ENST00000641213 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 PRAMEF2O60811 474 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 CELP19835 753 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 POU3F3P20264 500 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-211ENST00000641213 GFERP55789 205 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 DEFA1P59665 94 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 DEFA3P59666 94 aa15.74■□□□□ 0.11
PHGDH-211ENST00000641213 FGFBP1Q14512 234 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms