RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 CNIH4Q9P003 139 aa10.4□□□□□ -0.74
MECP2-226ENST00000640414 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.74
MECP2-226ENST00000640414 PACSIN3Q9UKS6 424 aa10.4□□□□□ -0.74
MECP2-226ENST00000640414 CNOT11Q9UKZ1 510 aaKnown RBP10.4□□□□□ -0.74
MECP2-226ENST00000640414 NINQ8N4C6 2090 aa10.4□□□□□ -0.75
MECP2-226ENST00000640414 C17orf105B2RV13 164 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 HRKO00198 91 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 PLOD2O00469 737 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 SPRY1O43609 319 aaPredicted RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 DNAJC8O75937 253 aaPredicted RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 CT62P0C5K7 136 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 TNNI3P19429 210 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 S1PR1P21453 382 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 CCKARP32238 428 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 PGM1P36871 562 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 SLC7A2P52569 658 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 MTPNP58546 118 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 MRPS35P82673 323 aaKnown RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 PRICKLE4Q2TBC4 344 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 SPDYE7PQ495Y7 208 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 DNAL1Q4LDG9 190 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 C6orf120Q7Z4R8 191 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 TRIML2Q8N7C3 387 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 OR8J3Q8NGG0 315 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 OR5AK3PQ8NH89 298 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 NUBPLQ8TB37 319 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 SLC22A8Q8TCC7 542 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 ZNF721Q8TF20 911 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 ROBO4Q8WZ75 1007 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 FAM120BQ96EK7 910 aaKnown RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 ZC3HAV1LQ96H79 300 aaKnown RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 ZNF597Q96LX8 424 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 DGAT2Q96PD7 388 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 TM9SF2Q99805 663 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 TUBA1CQ9BQE3 449 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 CPPED1Q9BRF8 314 aaPredicted RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 SLC35A5Q9BS91 424 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 THUMPD3Q9BV44 507 aaKnown RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 UBQLN3Q9H347 655 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 GPATCH2Q9NW75 528 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 NDE1Q9NXR1 346 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 ADA2Q9NZK5 511 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 MAT2BQ9NZL9 334 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 NTMQ9P121 344 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 GMPR2Q9P2T1 348 aaKnown RBP10.39□□□□□ -0.75
MECP2-226ENST00000640414 CDC42EP3Q9UKI2 254 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 GMEB1Q9Y692 573 aa10.39□□□□□ -0.75
MECP2-226ENST00000640414 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 UPK1AO00322 258 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 NME4O00746 187 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 EMC8O43402 210 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 PLOD3O60568 738 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 TMCC2O75069 709 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 NME6O75414 186 aaPredicted RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 TNFSF13O75888 250 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 CYP4B1P13584 511 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 GALNSP34059 522 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 SOAT1P35610 550 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 CHI3L1P36222 383 aaPredicted RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 CD79BP40259 229 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 PCYT1AP49585 367 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 MVDP53602 400 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 PRKAG1P54619 331 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 CASP9P55211 416 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ZNF267Q14586 743 aaPredicted RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 EIPR1Q53HC9 387 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 COX20Q5RI15 118 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 FNDC7Q5VTL7 733 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 SAXO2Q658L1 398 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 PGM2L1Q6PCE3 622 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 TMEM64Q6YI46 380 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C22orf34Q6ZV56 151 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ZNF550Q7Z398 422 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 BTLAQ7Z6A9 289 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C9orf40Q8IXQ3 194 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C10orf111Q8N326 155 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 OR2L13Q8N349 312 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 RNF148Q8N7C7 305 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C7orf57Q8NEG2 295 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 PNPT1Q8TCS8 783 aaKnown RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 ZNF675Q8TD23 568 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ABTB1Q969K4 478 aaPredicted RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 UTP4Q969X6 686 aaKnown RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 NEURL3Q96EH8 262 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C16orf58Q96GQ5 468 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ZNF583Q96ND8 569 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 SH3GL1Q99961 368 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ANGPTL4Q9BY76 406 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 KAT8Q9H7Z6 458 aaKnown RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 C3orf14Q9HBI5 128 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 SPAG4Q9NPE6 437 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ABCD2Q9UBJ2 740 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 ZNF639Q9UID6 485 aa10.38□□□□□ -0.75
MECP2-226ENST00000640414 C19orf53Q9UNZ5 99 aaPredicted RBP10.38□□□□□ -0.75
MECP2-226ENST00000640414 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.37□□□□□ -0.75
MECP2-226ENST00000640414 A0A087WV62 115 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms