RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RGS1Q08116 209 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 CRMP1Q14194 572 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 SF3A2Q15428 464 aaKnown RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 OR1Q1Q15612 314 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 ZIC1Q15915 447 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 CD200R1LQ6Q8B3 271 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF761Q86XN6 746 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 CDK20Q8IZL9 346 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 GJD3Q8N144 294 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 RFLNBQ8N5W9 214 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.246e-6■■□□□ 12.3
SCARB2-221ENST00000640341 ZMYND19Q96E35 227 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 GIMAP5Q96F15 307 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 TEX101Q9BY14 249 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 NT5DC2Q9H857 520 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 MTHFD2LQ9H903 347 aaPredicted RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 SNRPBP14678 240 aaKnown RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 GRPRP30550 384 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 PRMT2P55345 433 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 NTRK2Q16620 822 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 PRSS45Q7RTY3 260 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 VN1R4Q7Z5H5 301 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 TRIM63Q969Q1 353 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 DNAJA3Q96EY1 480 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 ABHD1Q96SE0 405 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 SDF2Q99470 211 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 NDC1Q9BTX1 674 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 SLC17A9Q9BYT1 436 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 CDCP1Q9H5V8 836 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 MRPS18AQ9NVS2 196 aaKnown RBP13.56□□□□□ -0.24
SCARB2-221ENST00000640341 NCKAP1Q9Y2A7 1128 aa13.56□□□□□ -0.24
SCARB2-221ENST00000640341 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 LRRN3E7EW58 273 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 CDC123O75794 336 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ALX3O95076 343 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 TFPIP10646 304 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 HTR2AP28223 471 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 PRKAR1BP31321 381 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 NIPAL3Q6P499 406 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 MEPCEQ7L2J0 689 aaKnown RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 OR4C6Q8NH72 309 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 BPIFA2Q96DR5 249 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 HS6ST2Q96MM7 605 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 MS4A4EQ96PG1 132 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF559Q9BR84 538 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 LRRN3Q9H3W5 708 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 KRCC1Q9NPI7 259 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ACOXLQ9NUZ1 547 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 A0A0A6YYJ9 748 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 P2RX6O15547 441 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 PEPDP12955 493 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ACSL1P33121 698 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 GABRA3P34903 492 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 CCR6P51684 374 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 CLDN20P56880 219 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 SFXN4Q6P4A7 337 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ASPGQ86U10 573 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 FRMD1Q8N878 549 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 OR5H6Q8NGV6 325 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 KIAA1143Q96AT1 154 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ORAI3Q9BRQ5 295 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 FN3KQ9H479 309 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 IL23AQ9NPF7 189 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 BRD7Q9NPI1 651 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 FAM171A2A8MVW0 826 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 RASGRP1O95267 797 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 TRAPPC2P0DI81 140 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 TRAPPC2BP0DI82 140 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 HLA-DMAP28067 261 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 UQCRC1P31930 480 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ATP12AP54707 1039 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 FXYD6P3P58550 94 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ERVK-21P61565 698 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 RUNX3Q13761 415 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 RUNX2Q13950 521 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 OR4K13Q8NH42 304 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 OR52N1Q8NH53 320 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF671Q8TAW3 534 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ZFAND1Q8TCF1 268 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 PATE1Q8WXA2 126 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 PTP4A1Q93096 173 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 MOAP1Q96BY2 351 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 ZNF649Q9BS31 505 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 C1QTNF2Q9BXJ5 285 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 GSDMCQ9BYG8 508 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
SCARB2-221ENST00000640341 MRPS2Q9Y399 296 aaKnown RBP13.55□□□□□ -0.24
SCARB2-221ENST00000640341 CDHR4A6H8M9 788 aa13.54□□□□□ -0.24
SCARB2-221ENST00000640341 PRKNO60260 465 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-221ENST00000640341 GIFP27352 417 aa13.54□□□□□ -0.24
SCARB2-221ENST00000640341 BMP8BP34820 402 aa13.54□□□□□ -0.24
SCARB2-221ENST00000640341 IGFALSP35858 605 aa13.54□□□□□ -0.24
SCARB2-221ENST00000640341 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-221ENST00000640341 FOXK2Q01167 660 aa13.54□□□□□ -0.24
SCARB2-221ENST00000640341 BMP8AQ7Z5Y6 402 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms