RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 NXNL2Q5VZ03 156 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 LINC00114Q6XXX2 140 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 GDPGP1Q6ZNW5 385 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 USP43Q70EL4 1123 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 GATAD2AQ86YP4 633 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 GID4Q8IVV7 300 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 SLC34A3Q8N130 599 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 ANKK1Q8NFD2 765 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 OR9Q1Q8NGQ5 310 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 SLC2A12Q8TD20 617 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-211ENST00000639534 ZHX1-C8orf76Q96EF9 292 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 SLC19A3Q9BZV2 496 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 OR8D2Q9GZM6 311 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 OR52D1Q9H346 318 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 GAREM1Q9H706 876 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 ISYNA1Q9NPH2 558 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 H2AFY2Q9P0M6 372 aaPredicted RBP13.38□□□□□ -0.27
CHD1L-211ENST00000639534 RARRES3Q9UL19 164 aa13.38□□□□□ -0.27
CHD1L-211ENST00000639534 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 C2orf92A0A1B0GVN3 265 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 CCRL2O00421 344 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SCDO00767 359 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 ONECUT2O95948 504 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 IGF2P01344 180 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 CFIP05156 583 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SCG5P05408 212 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 MTNR1AP48039 350 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 CCL7P80098 99 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 PLAURQ03405 335 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SRSF5Q13243 272 aaKnown RBP13.37□□□□□ -0.27
CHD1L-211ENST00000639534 COL9A2Q14055 689 aaPredicted RBP13.37□□□□□ -0.27
CHD1L-211ENST00000639534 NSDHLQ15738 373 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 ZNF829Q3KNS6 432 aaPredicted RBP13.37□□□□□ -0.27
CHD1L-211ENST00000639534 ALG10BQ5I7T1 473 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 WDR88Q6ZMY6 472 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 LNX2Q8N448 690 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 NANOGP1Q8N7R0 232 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 FAM71CQ8NEG0 241 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 C17orf47Q8NEP4 570 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 TSLPQ969D9 159 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 HSPBAP1Q96EW2 488 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 SAMD8Q96LT4 415 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 DPH1Q9BZG8 443 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 UBQLN3Q9H347 655 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 HHATLQ9HCP6 504 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 PALMDQ9NP74 551 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
CHD1L-211ENST00000639534 LY6G6EA0A0G2JKS1 128 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 TMEM129A0AVI4 362 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 CDC42EP2O14613 210 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 PDGFBP01127 241 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-211ENST00000639534 NGFRP08138 427 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SYPP08247 313 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SAGP10523 405 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-211ENST00000639534 PNMTP11086 282 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 UBL4AP11441 157 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 MYF5P13349 255 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 MAKP20794 623 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 TBXA2RP21731 343 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 HTR1FP30939 366 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SLC6A6P31641 620 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SLC6A8P48029 635 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SLC9A3P48764 834 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 CDH11P55287 796 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 MLLT11Q13015 90 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SPHARQ15513 63 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 PERM1Q5SV97 790 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 AADACL4Q5VUY2 407 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SLC30A6Q6NXT4 461 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 C19orf48Q6RUI8 117 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 ZNF574Q6ZN55 896 aaPredicted RBP13.36□□□□□ -0.27
CHD1L-211ENST00000639534 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 SLCO6A1Q86UG4 719 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 OR1N1Q8NGS0 311 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 DYNC2LI1Q8TCX1 351 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 GRHL3Q8TE85 626 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 ADIPOR1Q96A54 375 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 MKL2Q9ULH7 1088 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 ICAM5Q9UMF0 924 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 LSM2Q9Y333 95 aaKnown RBP13.36□□□□□ -0.27
CHD1L-211ENST00000639534 PCDHGA3Q9Y5H0 932 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 A3GALT2U3KPV4 340 aa13.36□□□□□ -0.27
CHD1L-211ENST00000639534 U3KQA8 63 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms