RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CENPVL1A0A0U1RR11 272 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 FABP7O15540 132 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 SC5DO75845 299 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 HTR2AP28223 471 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR10A3P58181 314 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 RGS1Q08116 209 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 FGL2Q14314 439 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 FCN2Q15485 313 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 FAM27D1Q5T7N8 215 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ANKRD54Q6NXT1 300 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PFN4Q8NHR9 129 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 TRMT10AQ8TBZ6 339 aaKnown RBP18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 TEAD3Q99594 435 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 ENKD1Q9H0I2 346 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 DPAGT1Q9H3H5 408 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 TMEM5Q9Y2B1 443 aa18.67■□□□□ 0.58
SYNGAP1-227ENST00000638142 PRR23AA6NEV1 266 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 E9PI62 339 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 REM1O75628 298 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 SOX30O94993 753 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 DBIP07108 87 aaKnown RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 FUT1P19526 365 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 RPS4Y1P22090 263 aaKnown RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 STOMP27105 288 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 RPS7P62081 194 aaKnown RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 FOXK2Q01167 660 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR1Q1Q15612 314 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 GPR68Q15743 365 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 GARNL3Q5VVW2 1013 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 VN1R4Q7Z5H5 301 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR4K14Q8NGD5 310 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 PTP4A1Q93096 173 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 PHF21AQ96BD5 680 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ARMC5Q96C12 935 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ABHD1Q96SE0 405 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 GHITMQ9H3K2 345 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 KIR3DX1Q9H7L2 352 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 EMC7Q9NPA0 242 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 C20orf141Q9NUB4 165 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 CLDND1Q9NY35 253 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZNF624Q9P2J8 865 aaPredicted RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZNF888P0CJ79 500 aaPredicted RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 PRG2P13727 222 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 RPS15AP62244 130 aaKnown RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 IKZF1Q13422 519 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 TMPRSS11FQ6ZWK6 438 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 PAQR7Q86WK9 346 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 CDK20Q8IZL9 346 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZNF619Q8N2I2 560 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 TEX19Q8NA77 164 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 IFT27Q9BW83 186 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ELF5Q9UKW6 265 aaPredicted RBP18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 ZMIZ1Q9ULJ6 1067 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 NPFFR2Q9Y5X5 522 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 NUBP2Q9Y5Y2 271 aa18.66■□□□□ 0.58
SYNGAP1-227ENST00000638142 LINC00862A6NCI5 91 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC9B1P1A6NJY1 282 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 FZD7O75084 574 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 LYPD3O95274 346 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SBK2P0C263 348 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 E2F1Q01094 437 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC3A1Q07837 685 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 KRT74Q7RTS7 529 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR8H1Q8NGG4 311 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 NT5CQ8TCD5 201 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 ASB16Q96NS5 453 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 RANBP3Q9H6Z4 567 aaPredicted RBP18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 NUDT15Q9NV35 164 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 MOSPD1Q9UJG1 213 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC35A3Q9Y2D2 325 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 HEBP2Q9Y5Z4 205 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 FMO6PO60774 539 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 NID1P14543 1247 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 PER3P56645 1201 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 MAPK14Q16539 360 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 IDO2Q6ZQW0 420 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC44A3Q8N4M1 653 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 DTX3Q8N9I9 347 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 MAP6Q96JE9 813 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 C4orf36Q96KX1 117 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 RSPH9Q9H1X1 276 aaPredicted RBP18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 IL23AQ9NPF7 189 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 PTTG3PQ9NZH4 202 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR6C2Q9NZP2 312 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 KCMF1Q9P0J7 381 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 SERGEFQ9UGK8 458 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 DPP7Q9UHL4 492 aa18.65■□□□□ 0.58
SYNGAP1-227ENST00000638142 STX11O75558 287 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC16A1P53985 500 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC36A2Q495M3 483 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 MRPL2Q5T653 305 aaKnown RBP18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 THSD4Q6ZMP0 1018 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 MS4A15Q8N5U1 240 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 C17orf47Q8NEP4 570 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SLC2A12Q8TD20 617 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 SMARCD2Q92925 531 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 BPIFA2Q96DR5 249 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 PGLYRP3Q96LB9 341 aa18.64■□□□□ 0.58
SYNGAP1-227ENST00000638142 OR51V1Q9H2C8 321 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms