RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 PLRG1O43660 514 aaKnown RBP5.77□□□□□ -1.49
SCN1A-217ENST00000637988 KIAA0513O60268 411 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 UGDHO60701 494 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 JRKO75564 520 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 MED6O75586 246 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 MAOBP27338 520 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 MAP2K4P45985 399 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 ZP2Q05996 745 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 KLF1Q13351 362 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-217ENST00000637988 CTC1Q2NKJ3 1217 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 BRICD5Q6PL45 260 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 OSTM1Q86WC4 334 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 DNAJC22Q8N4W6 341 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 LRRC57Q8N9N7 239 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 OR14K1Q8NGZ2 314 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 FAM71F1Q96KD3 344 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-217ENST00000637988 CTRCQ99895 268 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 TMEM45AQ9NWC5 275 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 PPT2Q9UMR5 302 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
SCN1A-217ENST00000637988 SLC22A7Q9Y694 548 aa5.77□□□□□ -1.49
SCN1A-217ENST00000637988 K7EQS6 105 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 RFPL3O75679 317 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 TMEM63AO94886 807 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 ZNF865P0CJ78 1059 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 HIST1H1TP22492 207 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 LSSP48449 732 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 MVKQ03426 396 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 USF2Q15853 346 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 COL28A1Q2UY09 1125 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 RTP2Q5QGT7 225 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NKAIN2Q5VXU1 208 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 OR52W1Q6IF63 320 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 TMEM65Q6PI78 240 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NANPQ8TBE9 248 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 APH1AQ96BI3 265 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SCRN2Q96FV2 425 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 BSCL2Q96G97 398 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 TSSK2Q96PF2 358 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 ADOQ96SZ5 270 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SHARPINQ9H0F6 387 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SLC23A2Q9UGH3 650 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 PHRF1Q9P1Y6 1649 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 CACNA1CQ13936 2221 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 A0A0A6YYC8 382 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NPIPA5A0A0B4J1W7 369 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 A8MT66 165 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 MCRIP1C9JLW8 97 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NPIPA7E9PJI5 369 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 C17orf112F2Z3M2 114 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 I3L1I5 382 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 DLGAP1O14490 977 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SCAMP2O15127 329 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 APOL3O95236 402 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 RASAL1O95294 804 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 VNN1O95497 513 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NPIPA8P0DM63 369 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 GRPRP30550 384 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 PPIAP62937 165 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 GALEQ14376 348 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 RTL8BQ17RB0 113 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 LRRC26Q2I0M4 334 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 MPEG1Q2M385 716 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 ACSBG2Q5FVE4 666 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 HAGHLQ6PII5 290 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 GJC3Q8NFK1 279 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 AURKBQ96GD4 344 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 INIPQ9NRY2 104 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SERTAD4Q9NUC0 356 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 AQP12BA6NM10 295 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 HAX1O00165 279 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SERPINA7P05543 415 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 DNAJB13P59910 316 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 APOFQ13790 326 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 ASRGL1Q7L266 308 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 IGFN1Q86VF2 1251 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SULF2Q8IWU5 870 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 AQP12AQ8IXF9 295 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 OR7G1Q8NGA0 311 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 LRTOMTQ8WZ04 291 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 FAM46AQ96IP4 442 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 CITED4Q96RK1 184 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 RANBP9Q96S59 729 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 OBP2AQ9NY56 170 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 F6UZH7 168 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 M0R1B8 84 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 DVL2O14641 736 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 GPR137BO60478 399 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 PRKACBP22694 351 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 CERS1P27544 350 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 MLLT10P55197 1068 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SCAPQ12770 1279 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 TSTQ16762 297 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 VWA5B1Q5TIE3 1220 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 CES4AQ5XG92 561 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 CEACAM19Q7Z692 300 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 TEX26Q8N6G2 289 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 SMG8Q8ND04 991 aaKnown RBP5.76□□□□□ -1.49
SCN1A-217ENST00000637988 NEIL3Q8TAT5 605 aa5.76□□□□□ -1.49
SCN1A-217ENST00000637988 ASB12Q8WXK4 309 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms