RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 PM20D2Q8IYS1 436 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DHRSXQ8N5I4 330 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TRIML2Q8N7C3 387 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ZNF441Q8N8Z8 693 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 OR4A15Q8NGL6 344 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DOK4Q8TEW6 326 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ZFP90Q8TF47 636 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DIO2Q92813 273 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RNASE6Q93091 150 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 PPCDCQ96CD2 204 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 PYURFQ96I23 114 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RDH12Q96NR8 316 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SECISBP2Q96T21 854 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 CLEC4MQ9H2X3 399 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 CRIM1Q9NZV1 1036 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ZNF629Q9UEG4 869 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 EXO1Q9UQ84 846 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 NINQ8N4C6 2090 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 C2orf92A0A1B0GVN3 265 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 GLOD5A6NK44 160 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 A6NNC1 897 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 UPK1AO00322 258 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TBX19O60806 448 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SNX4O95219 450 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 AIFM1O95831 613 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 CST1P01037 141 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 IL2RAP01589 272 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 MT-ND1P03886 318 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 CLPSP04118 112 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 KLK1P06870 262 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SMIM18P0DKX4 95 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 BMP5P22003 454 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DNASE1P24855 282 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 CAPGP40121 348 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TMED10P49755 219 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 ALDH3A2P51648 485 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RPP38P78345 283 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 CRYZQ08257 329 aaKnown RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 EPS8Q12929 822 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 DAG1Q14118 895 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ACSF3Q4G176 576 aaPredicted RBP11.5□□□□□ -0.57
CTSD-208ENST00000636843 HLA-DQA1Q5Y7H0 255 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ZDHHC13Q8IUH4 622 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 C10orf111Q8N326 155 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 FAM86B1Q8N7N1 296 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 SPPL2AQ8TCT8 520 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TMBIM1Q969X1 311 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 POM121Q96HA1 1249 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 TIMP4Q99727 224 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 RAD21L1Q9H4I0 556 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 CXorf21Q9HAI6 301 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 ADAM29Q9UKF5 820 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 NPFFR2Q9Y5X5 522 aa11.5□□□□□ -0.57
CTSD-208ENST00000636843 WASHC1A8K0Z3 465 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 H0YAE9 185 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 GNGT2O14610 69 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 TRAPPC6AO75865 159 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 H6PDO95479 791 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 HPNP05981 417 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 KDELR2P33947 212 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 MAGEA2P43356 314 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 RPL5P46777 297 aaKnown RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 CDK9P50750 372 aaKnown RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 NRG3P56975 720 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 FUT7Q11130 342 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 SNTB1Q13884 538 aaKnown RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 GK3PQ14409 553 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 CCNYL2Q5T2Q4 361 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 RNF220Q5VTB9 566 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 NSUN5P2Q63ZY6 315 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 ZNF551Q7Z340 670 aaPredicted RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 NUDT13Q86X67 352 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 KIF18BQ86Y91 864 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 PTOV1Q86YD1 416 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 NAXEQ8NCW5 288 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 OR5K1Q8NHB7 308 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 MAGEE2Q8TD90 523 aaPredicted RBP11.49□□□□□ -0.57
CTSD-208ENST00000636843 HSPBAP1Q96EW2 488 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 ANGPTL4Q9BY76 406 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 PRDM14Q9GZV8 571 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 UBQLN3Q9H347 655 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 MYRFQ9Y2G1 1151 aa11.49□□□□□ -0.57
CTSD-208ENST00000636843 SMIM31A0A1B0GVY4 71 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 G3V2T6 193 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 H3BNH8 94 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 PGRMC2O15173 223 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 PABPC4LP0CB38 370 aaKnown RBP11.48□□□□□ -0.57
CTSD-208ENST00000636843 KLK2P20151 261 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 SSTR4P31391 388 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 MASP1P48740 699 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 FBXW4P57775 412 aa11.48□□□□□ -0.57
CTSD-208ENST00000636843 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms