RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 OR5AK2Q8NH90 309 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF566Q969W8 418 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF382Q96SR6 550 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 CACNG6Q9BXT2 260 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 IKZF5Q9H5V7 419 aa5.7□□□□□ -1.5
SCN1A-212ENST00000636194 EVLQ9UI08 416 aaPredicted RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 NOSIPQ9Y314 301 aaKnown RBP5.7□□□□□ -1.5
SCN1A-212ENST00000636194 ADGRB3O60242 1522 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 G3V3Y1 287 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 DNPH1O43598 174 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CH25HO95992 272 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TFP02787 698 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MAOBP27338 520 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RABIFP47224 123 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ATP1B3P54709 279 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GALEQ14376 348 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 LIPJQ5W064 366 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CLEC6AQ6EIG7 209 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SBSNQ6UWP8 590 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 FBXW12Q6X9E4 464 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MIB2Q96AX9 1013 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF764Q96H86 408 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SPAG8Q99932 426 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ARV1Q9H2C2 271 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SUV39H2Q9H5I1 410 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 LRRC19Q9H756 370 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TM7SF3Q9NS93 570 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SLC17A6Q9P2U8 582 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MAFBQ9Y5Q3 323 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TEX50A0A1B0GTY4 177 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 C12orf71A8MTZ7 269 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ST8SIA5O15466 376 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 UBBP0CG47 229 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ACPPP15309 386 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RARRES1P49788 294 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RAP2BP61225 183 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ARHGAP1Q07960 439 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 HNRNPA0Q13151 305 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GRM7Q14831 915 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ELP2Q6IA86 826 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 BTNL8Q6UX41 500 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 OVCH1Q7RTY7 1134 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TMEM150AQ86TG1 271 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MAP4K3Q8IVH8 894 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZDHHC14Q8IZN3 488 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PLPP5Q8NEB5 264 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GJC3Q8NFK1 279 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 P2RY11Q96G91 374 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RDH12Q96NR8 316 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ALG8Q9BVK2 526 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 EXTL2Q9UBQ6 330 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 EXO1Q9UQ84 846 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PRAF2O60831 178 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CKMT1AP12532 417 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RBP2P50120 134 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 UBE2KP61086 200 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 RPS18P62269 152 aaKnown RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF266Q14584 549 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 NXNL2Q5VZ03 156 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 DGAT2L7PQ6IED9 249 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MENTQ9BUN1 341 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 KCNF1Q9H3M0 494 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GIMAP2Q9UG22 337 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CDHR4A6H8M9 788 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SOCS5O75159 536 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ARSBP15848 533 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 AQP2P41181 271 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 LRIT3Q3SXY7 679 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PLAC9Q5JTB6 97 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CHADLQ6NUI6 762 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SIGLECL1Q8N7X8 197 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZUFSPQ96AP4 578 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 GPN2Q9H9Y4 310 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 DNAJC27Q9NZQ0 273 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TAC3Q9UHF0 121 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 HS3ST4Q9Y661 456 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ANKRD36CQ5JPF3 1778 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 NEXMIFQ5QGS0 1516 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TNCP24821 2201 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 F5H5P2 479 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 INMT-MINDY4F8WBC2 141 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 NRP1O14786 923 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 HOXA3O43365 443 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 MMP20O60882 483 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 DFFBO76075 338 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CPOXP36551 454 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 CASP7P55210 303 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ZNF33BQ06732 778 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SLC36A2Q495M3 483 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SSX9Q7RTT3 188 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PHF13Q86YI8 300 aaPredicted RBP5.69□□□□□ -1.5
SCN1A-212ENST00000636194 KDM1BQ8NB78 822 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 PXT1Q8NFP0 134 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 NAT6Q93015 286 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 TOMM40LQ969M1 308 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 FAM131CQ96AQ9 280 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 METTL9Q9H1A3 318 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 ANKRD19PQ9H560 264 aa5.69□□□□□ -1.5
SCN1A-212ENST00000636194 HES4Q9HCC6 221 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms