RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 CBFBQ13951 182 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 SCARB2Q14108 478 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 PLPPR5Q32ZL2 321 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 LIN52Q52LA3 116 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 DCST1Q5T197 706 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 REEP3Q6NUK4 255 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 MTFR2Q6P444 385 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 C3P1Q6ZMU1 363 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 KRT73Q86Y46 540 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 ANKS4BQ8N8V4 417 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 C11orf65Q8NCR3 313 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 FAM71CQ8NEG0 241 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 OR5W2Q8NH69 310 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 ZBTB8AQ96BR9 441 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 PRDM14Q9GZV8 571 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 EFCAB1Q9HAE3 211 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 ANGPT4Q9Y264 503 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 MEMO1Q9Y316 297 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 IFT52Q9Y366 437 aa14.02□□□□□ -0.16
CLN6-211ENST00000635754 HEATR5AQ86XA9 2040 aa14.02□□□□□ -0.17
CLN6-211ENST00000635754 LRRK2Q5S007 2527 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 MED12Q93074 2177 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 CLEC18AA5D8T8 446 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 E9PLN8 166 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 PGM3O95394 542 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 THBS1P07996 1170 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 GABRA1P14867 456 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ETS2P15036 469 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 POU3F2P20265 443 aaPredicted RBP14.01□□□□□ -0.17
CLN6-211ENST00000635754 PRDX6P30041 224 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 SRSF1Q07955 248 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLN6-211ENST00000635754 RBBP4Q09028 425 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 LARS2Q15031 903 aaKnown RBP14.01□□□□□ -0.17
CLN6-211ENST00000635754 ADRM1Q16186 407 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 RABL3Q5HYI8 236 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 CLEC18BQ6UXF7 455 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 NET1Q7Z628 596 aaPredicted RBP14.01□□□□□ -0.17
CLN6-211ENST00000635754 SERPINA11Q86U17 422 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 CLEC18CQ8NCF0 446 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 OR10A6Q8NH74 314 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ARSGQ96EG1 525 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ECSITQ9BQ95 431 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 VKORC1Q9BQB6 163 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 SPATA9Q9BWV2 254 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ARMC7Q9H6L4 198 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 EXOSC3Q9NQT5 275 aaKnown RBP14.01□□□□□ -0.17
CLN6-211ENST00000635754 ALKBH4Q9NXW9 302 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ZNF232Q9UNY5 417 aa14.01□□□□□ -0.17
CLN6-211ENST00000635754 ZNF443Q9Y2A4 671 aaPredicted RBP14.01□□□□□ -0.17
CLN6-211ENST00000635754 C7orf72A4D263 438 aa14□□□□□ -0.17
CLN6-211ENST00000635754 CLDN24A6NM45 220 aa14□□□□□ -0.17
CLN6-211ENST00000635754 SHISA8B8ZZ34 492 aa14□□□□□ -0.17
CLN6-211ENST00000635754 H3BML4 177 aa14□□□□□ -0.17
CLN6-211ENST00000635754 HOXD4P09016 255 aaPredicted RBP14□□□□□ -0.17
CLN6-211ENST00000635754 LINGO3P0C6S8 592 aa14□□□□□ -0.17
CLN6-211ENST00000635754 PEPDP12955 493 aa14□□□□□ -0.17
CLN6-211ENST00000635754 CPN1P15169 458 aa14□□□□□ -0.17
CLN6-211ENST00000635754 PGCP20142 388 aa14□□□□□ -0.17
CLN6-211ENST00000635754 PTGER4P35408 488 aa14□□□□□ -0.17
CLN6-211ENST00000635754 EIF1P41567 113 aaKnown RBP14□□□□□ -0.17
CLN6-211ENST00000635754 NUDT2P50583 147 aa14□□□□□ -0.17
CLN6-211ENST00000635754 ART3Q13508 389 aa14□□□□□ -0.17
CLN6-211ENST00000635754 SF3B4Q15427 424 aaKnown RBP eCLIP14□□□□□ -0.17
CLN6-211ENST00000635754 ZSWIM7Q19AV6 140 aa14□□□□□ -0.17
CLN6-211ENST00000635754 TMEM44Q2T9K0 475 aa14□□□□□ -0.17
CLN6-211ENST00000635754 MRPL2Q5T653 305 aaKnown RBP14□□□□□ -0.17
CLN6-211ENST00000635754 C1orf185Q5T7R7 199 aa14□□□□□ -0.17
CLN6-211ENST00000635754 ZNF836Q6ZNA1 936 aa14□□□□□ -0.17
CLN6-211ENST00000635754 ARPINQ7Z6K5 226 aa14□□□□□ -0.17
CLN6-211ENST00000635754 VRK2Q86Y07 508 aa14□□□□□ -0.17
CLN6-211ENST00000635754 PTOV1Q86YD1 416 aa14□□□□□ -0.17
CLN6-211ENST00000635754 ULK2Q8IYT8 1036 aa14□□□□□ -0.17
CLN6-211ENST00000635754 GTPBP8Q8N3Z3 284 aaPredicted RBP14□□□□□ -0.17
CLN6-211ENST00000635754 CCDC197Q8NCU1 140 aa14□□□□□ -0.17
CLN6-211ENST00000635754 HIPK4Q8NE63 616 aa14□□□□□ -0.17
CLN6-211ENST00000635754 OR5M1Q8NGP8 315 aa14□□□□□ -0.17
CLN6-211ENST00000635754 GPR119Q8TDV5 335 aa14□□□□□ -0.17
CLN6-211ENST00000635754 SSC4DQ8WTU2 575 aa14□□□□□ -0.17
CLN6-211ENST00000635754 WDYHV1Q96HA8 205 aa14□□□□□ -0.17
CLN6-211ENST00000635754 RNF145Q96MT1 663 aa14□□□□□ -0.17
CLN6-211ENST00000635754 ZNF607Q96SK3 696 aa14□□□□□ -0.17
CLN6-211ENST00000635754 KLHDC3Q9BQ90 382 aa14□□□□□ -0.17
CLN6-211ENST00000635754 SPATA5L1Q9BVQ7 753 aa14□□□□□ -0.17
CLN6-211ENST00000635754 STOML1Q9UBI4 398 aa14□□□□□ -0.17
CLN6-211ENST00000635754 GPC6Q9Y625 555 aaPredicted RBP14□□□□□ -0.17
CLN6-211ENST00000635754 DIDO1Q9BTC0 2240 aaKnown RBP14□□□□□ -0.17
CLN6-211ENST00000635754 MYO7BQ6PIF6 2116 aa14□□□□□ -0.17
CLN6-211ENST00000635754 PHF3Q92576 2039 aaKnown RBP14□□□□□ -0.17
CLN6-211ENST00000635754 AHRRA9YTQ3 701 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 H0Y3Z8 333 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 BCAS1O75363 584 aaPredicted RBP13.99□□□□□ -0.17
CLN6-211ENST00000635754 LDLRP01130 860 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 PABPC4LP0CB38 370 aaKnown RBP13.99□□□□□ -0.17
CLN6-211ENST00000635754 ZNF708P17019 499 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 SLC6A8P48029 635 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 STARP49675 285 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 LHX2P50458 406 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 FOXF1Q12946 379 aa13.99□□□□□ -0.17
CLN6-211ENST00000635754 QPRTQ15274 297 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms