RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SLC13A2Q13183 592 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 CBX3Q13185 183 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 DCTN2Q13561 401 aaKnown RBP6.64□□□□□ -1.35
BRCA1-230ENST00000634433 SERTAD2Q14140 314 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 GRM7Q14831 915 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 GPR68Q15743 365 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 STK11Q15831 433 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 DEFB133Q30KQ1 61 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 DEFB110Q30KQ9 67 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM201Q5SNT2 666 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 SLC25A30Q5SVS4 291 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 SLC25A24Q6NUK1 477 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 KRT74Q7RTS7 529 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 OLIG3Q7RTU3 272 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 P2RY8Q86VZ1 359 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM52Q8NDY8 209 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 ACOT11Q8WXI4 607 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-230ENST00000634433 YIPF6Q96EC8 236 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 DGAT2Q96PD7 388 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 WFDC6Q9BQY6 131 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 NAA50Q9GZZ1 169 aaKnown RBP6.64□□□□□ -1.35
BRCA1-230ENST00000634433 RACGAP1Q9H0H5 632 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 QRSL1Q9H0R6 528 aaKnown RBP6.64□□□□□ -1.35
BRCA1-230ENST00000634433 ZMAT3Q9HA38 289 aaKnown RBP6.64□□□□□ -1.35
BRCA1-230ENST00000634433 PRTFDC1Q9NRG1 225 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 MAN2C1Q9NTJ4 1040 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 C14orf105Q9NVL8 296 aa6.64□□□□□ -1.35
BRCA1-230ENST00000634433 A0A087WUU8 490 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 A0A0A6YYC8 382 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 A0A1W2PPW3 197 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 IRGMA1A4Y4 181 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 FITM1A5D6W6 292 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 FIGNL2A6NMB9 653 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 I3L1I5 382 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 BCAT2O15382 392 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 KIAA0513O60268 411 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TPST2O60704 377 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 GABARAPO95166 117 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 NID1P14543 1247 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF3P17036 446 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 RPS4Y1P22090 263 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 NOS3P29474 1203 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 MAP3K8P41279 467 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 CAMLGP49069 296 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ARL4DP49703 201 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 PSMD4P55036 377 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 EEF1A1P68104 462 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 IGLV3-21P80748 117 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ST3GAL4Q11206 333 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 NCF4Q15080 339 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ARSJQ5FYB0 599 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM236Q5W0B7 351 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 LINC00299Q6ZSB3 139 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 RASSF6Q6ZTQ3 369 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 RAB11FIP2Q7L804 512 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 COMTD1Q86VU5 262 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 PLXDC1Q8IUK5 500 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 LINC00346Q8IVM7 164 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 RNF113BQ8IZP6 322 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 CYP4Z2PQ8N1L4 340 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 CLIP4Q8N3C7 705 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 B3GNT7Q8NFL0 401 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TEX47Q8TBZ9 253 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 HOXB13Q92826 284 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 OSTF1Q92882 214 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 RIT1Q92963 219 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ZG16BQ96DA0 208 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 SLC41A3Q96GZ6 507 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TGM7Q96PF1 710 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 CDCA4Q9BXL8 241 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 POLDIP3Q9BY77 421 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 ALOXE3Q9BYJ1 711 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 PLGRKTQ9HBL7 147 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 SLC25A19Q9HC21 320 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM160Q9NX00 188 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 SIT1Q9Y3P8 196 aa6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TDRD6O60522 2096 aaKnown RBP6.63□□□□□ -1.35
BRCA1-230ENST00000634433 TRAPPC13A5PLN9 417 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CPSF4LA6NMK7 179 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 M0R3G1 203 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 FOXS1O43638 330 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 NUDT21O43809 227 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 BCAS1O75363 584 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SOX14O95416 240 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 HRGP04196 525 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CDK4P11802 303 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 FUT4P22083 530 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 SERPINB10P48595 397 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CSNK1EP49674 416 aaKnown RBP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 CDK5Q00535 292 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.62□□□□□ -1.35
BRCA1-230ENST00000634433 GINS1Q14691 196 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 MOGQ16653 247 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TMEM44Q2T9K0 475 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 PLAG1Q6DJT9 500 aa6.62□□□□□ -1.35
BRCA1-230ENST00000634433 ZNF836Q6ZNA1 936 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms