RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TSLPQ969D9 159 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 RNFT2Q96EX2 444 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 OPALINQ96PE5 141 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 DPYSL5Q9BPU6 564 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 DCSTAMPQ9H295 470 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 UBQLN3Q9H347 655 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 MKKSQ9NPJ1 570 aaPredicted RBP20.33■□□□□ 0.85
PNKP-220ENST00000627232 C20orf141Q9NUB4 165 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 SRPK3Q9UPE1 567 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 CLCA3PQ9Y6N3 262 aa20.33■□□□□ 0.85
PNKP-220ENST00000627232 ARID1BQ8NFD5 2236 aaPredicted RBP20.33■□□□□ 0.85
PNKP-220ENST00000627232 FRG2CA6NGY1 282 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 MYL12BO14950 172 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 IGKV3-11P04433 115 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 MTNR1AP48039 350 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 DCAF7P61962 342 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 C1DQ13901 141 aaKnown RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 TSTQ16762 297 aaKnown RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 KLHL26Q53HC5 615 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ARHGAP40Q5TG30 622 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 AADACL4Q5VUY2 407 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ULK3Q6PHR2 472 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ARHGAP22Q7Z5H3 698 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ADCK1Q86TW2 530 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 GATAD2AQ86YP4 633 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 GRHL3Q8TE85 626 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 FN3KQ9H479 309 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 PALMDQ9NP74 551 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 CLEC2DQ9UHP7 191 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 MRTO4Q9UKD2 239 aaKnown RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 GPR52Q9Y2T5 361 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 UNC13CQ8NB66 2214 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 CACNA1EQ15878 2313 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ARHGAP33O14559 1287 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ADAM11O75078 769 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 DDAH2O95865 285 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 CSTAP01040 98 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ZGLP1P0C6A0 271 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 CKMT1AP12532 417 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 BMP7P18075 431 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ENDOUP21128 410 aaKnown RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 TBXA2RP21731 343 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 LCN1P31025 176 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 MLLT11Q13015 90 aaPredicted RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 NNATQ16517 81 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 PLK5Q496M5 336 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 PRAMEF17Q5VTA0 474 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 NXNL2Q5VZ03 156 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ATCAYQ86WG3 371 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 FAM181AQ8N9Y4 354 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ZNF527Q8NB42 609 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 OR14A16Q8NHC5 309 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 SLC2A12Q8TD20 617 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ZNF721Q8TF20 911 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 DACH2Q96NX9 599 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 ATP13A2Q9NQ11 1180 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 MEPEQ9NQ76 525 aaPredicted RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 UBQLN4Q9NRR5 601 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 RPS6KB2Q9UBS0 482 aa20.32■□□□□ 0.84
PNKP-220ENST00000627232 EXOSC1Q9Y3B2 195 aaKnown RBP20.32■□□□□ 0.84
PNKP-220ENST00000627232 LY6G6EA0A0G2JKS1 128 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 LAMTOR5O43504 91 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 HCN1O60741 890 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 MYL12AP19105 171 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 GPR143P51810 404 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 CDH11P55287 796 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 FXYD6P3P58550 94 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 ACY1Q03154 408 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 ALG10BQ5I7T1 473 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 PEAR1Q5VY43 1037 aaPredicted RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 HSDL2Q6YN16 418 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 LNX2Q8N448 690 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 FAM71CQ8NEG0 241 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 OR4C3Q8NH37 302 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 DNAJA4Q8WW22 397 aaPredicted RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 S100ZQ8WXG8 99 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 DAZLQ92904 295 aaKnown RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 LCORQ96JN0 433 aaPredicted RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 CCNL2Q96S94 520 aaPredicted RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 OR51E2Q9H255 320 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 CHCHD3Q9NX63 227 aaKnown RBP20.31■□□□□ 0.84
PNKP-220ENST00000627232 BAIAP2Q9UQB8 552 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 SIGLEC7Q9Y286 467 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 U3KQA8 63 aa20.31■□□□□ 0.84
PNKP-220ENST00000627232 TMEM129A0AVI4 362 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 A8MUA0 341 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 BHLHE40O14503 412 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 PTP4A3O75365 173 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 CH25HO95992 272 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 PDGFBP01127 241 aaPredicted RBP20.3■□□□□ 0.84
PNKP-220ENST00000627232 SSX1Q16384 188 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 HLA-BQ31612 363 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 FNDC7Q5VTL7 733 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 RHBDD2Q6NTF9 364 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 GUSBP11Q6P575 273 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 SMARCD3Q6STE5 483 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 GDPGP1Q6ZNW5 385 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 RABEPKQ7Z6M1 372 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 ZNF321PQ8N8H1 164 aa20.3■□□□□ 0.84
PNKP-220ENST00000627232 PLPP5Q8NEB5 264 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms