RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 GXYLT1Q4G148 440 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 RPS26P11Q5JNZ5 115 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 PAGE3Q5JUK9 113 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 C1orf185Q5T7R7 199 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 HEPHL1Q6MZM0 1159 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 APOOLQ6UXV4 268 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 B3GNT6Q6ZMB0 384 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 Q6ZPB1 254 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 P4HA3Q7Z4N8 544 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 KRT73Q86Y46 540 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 DOLPP1Q86YN1 238 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 FADS6Q8N9I5 356 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 OR5M1Q8NGP8 315 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF563Q8TA94 476 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 TSPEARQ8WU66 669 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 WDR60Q8WVS4 1066 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 RND1Q92730 232 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 C1GALT1C1Q96EU7 318 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 CCDC120Q96HB5 630 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 TRIB1Q96RU8 372 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SH3GL1Q99961 368 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 VKORC1Q9BQB6 163 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 UGT2B28Q9BY64 529 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 QRSL1Q9H0R6 528 aaKnown RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 UBQLN3Q9H347 655 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF385DQ9H6B1 395 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SAR1AQ9NR31 198 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 GID8Q9NWU2 228 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 VAPAQ9P0L0 249 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ARMCX1Q9P291 453 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ANGPT4Q9Y264 503 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC35A3Q9Y2D2 325 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF835Q9Y2P0 537 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 MEMO1Q9Y316 297 aa6.55□□□□□ -1.36
NPLOC4-221ENST00000625705 ITPR1Q14643 2758 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ATRXP46100 2492 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 LOC100653049A0A140TA62 436 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC22A2O15244 555 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 UGT2B17O75795 530 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 KRT34O76011 436 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 C1QCP02747 245 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 DBIP07108 87 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CHRM4P08173 479 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 HOXD4P09016 255 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 PEPDP12955 493 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 BMP7P18075 431 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 PGCP20142 388 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC6A2P23975 617 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CHMP24386 653 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC7A1P30825 629 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RYKP34925 604 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 PTGER4P35408 488 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 EEFSECP57772 596 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 MTPNP58546 118 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RPS3AP61247 264 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 NCALDP61601 193 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CHRNEQ04844 493 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CRYZQ08257 329 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 PMPCAQ10713 525 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 FUT5Q11128 374 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ART3Q13508 389 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 FGFBP1Q14512 234 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ZNF141Q15928 474 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SGCBQ16585 318 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 TRMT5Q32P41 509 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 LIN52Q52LA3 116 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 KLHL26Q53HC5 615 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 LRIF1Q5T3J3 769 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 REP15Q6BDI9 236 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 TYW3Q6IPR3 259 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 POMZP3Q6PJE2 187 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ARSKQ6UWY0 536 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 FRRS1Q6ZNA5 592 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 LRRC74BQ6ZQY2 392 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 NCCRP1Q6ZVX7 275 aaPredicted RBP6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 MRGPRGQ86SM5 289 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 GRAMD2AQ8IUY3 354 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 POU5F2Q8N7G0 328 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 C11orf65Q8NCR3 313 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ATP6V1C2Q8NEY4 427 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 OR52P1PQ8NH57 321 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 NFKBIDQ8NI38 313 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 BBS10Q8TAM1 723 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC26A7Q8TE54 656 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CA5BP1Q8WTZ4 195 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SLC38A5Q8WUX1 472 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RNF138Q8WVD3 245 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 OIT3Q8WWZ8 545 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 TMEM234Q8WY98 164 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 MAL2Q969L2 176 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RELTQ969Z4 430 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 SDCCAG3Q96C92 435 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 TMEM19Q96HH6 336 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 RNF145Q96MT1 663 aa6.54□□□□□ -1.36
NPLOC4-221ENST00000625705 CGREF1Q99674 301 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms