RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PHOSPHO1Q8TCT1 267 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 ZFP90Q8TF47 636 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 JADE3Q92613 823 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
PNKP-218ENST00000625299 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 RADILQ96JH8 1075 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 PSD2Q9BQI7 771 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 COQ10BQ9H8M1 238 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 UBQLN4Q9NRR5 601 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 TAS2R7Q9NYW3 318 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 KLHL9Q9P2J3 617 aa12.97□□□□□ -0.33
PNKP-218ENST00000625299 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 A0A1W2PNR3 127 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 A0A1W2PR80 420 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SLC35F4A4IF30 521 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 PDPK1O15530 556 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 EFNA2O43921 213 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 RAD51DO75771 328 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 LY6HO94772 140 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SLC7A1P30825 629 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 THBS2P35442 1172 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 GZMKP49863 264 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SLC7A5Q01650 507 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 LCP2Q13094 533 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 DUSP5Q16690 384 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 TMEM108Q6UXF1 575 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 B3GLCTQ6Y288 498 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 ZNF100Q8IYN0 542 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SLC43A2Q8N370 569 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 COX18Q8N8Q8 333 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SLC16A11Q8NCK7 471 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 OR6Y1Q8NGX8 325 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 C3orf49Q96BT1 292 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 MS4A4EQ96PG1 132 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 ZNF300Q96RE9 604 aaPredicted RBP12.96□□□□□ -0.33
PNKP-218ENST00000625299 MID1IP1Q9NPA3 183 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 SIRT5Q9NXA8 310 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 GIN1Q9NXP7 522 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 STK38LQ9Y2H1 464 aa12.96□□□□□ -0.33
PNKP-218ENST00000625299 OR5H1A6NKK0 313 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 M0R1B8 84 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 OIP5O43482 229 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 KIAA0513O60268 411 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 IGHV3-9P01782 118 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 ALOX5P09917 674 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 CSF3P09919 207 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 DHRS4L1P0CG22 281 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 HNF1AP20823 631 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 FOXA1P55317 472 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 PKNOX1P55347 436 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 RUNX1T1Q06455 604 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 RASGEF1BQ0VAM2 473 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 CBLN3Q6UW01 205 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 IKBIPQ70UQ0 350 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 DEPDC4Q8N2C3 294 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 UBE2J2Q8N2K1 259 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 CEP70Q8NHQ1 597 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 RFWD2Q8NHY2 731 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.95□□□□□ -0.34
PNKP-218ENST00000625299 PROX1Q92786 737 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 C16orf58Q96GQ5 468 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 EGLN2Q96KS0 407 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 EML4Q9HC35 981 aaKnown RBP12.95□□□□□ -0.34
PNKP-218ENST00000625299 TMEM216Q9P0N5 145 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 ING1Q9UK53 422 aaPredicted RBP12.95□□□□□ -0.34
PNKP-218ENST00000625299 MGAT4BQ9UQ53 548 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 CARD8Q9Y2G2 431 aa12.95□□□□□ -0.34
PNKP-218ENST00000625299 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 NPIPA5A0A0B4J1W7 369 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 A0A1W2PQD3 144 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 CIB4A0PJX0 185 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 NPIPA7E9PJI5 369 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 H7C417 338 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 KIF2AO00139 706 aaPredicted RBP12.94□□□□□ -0.34
PNKP-218ENST00000625299 WIPF1O43516 503 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 RGS14O43566 566 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 CRCPO75575 148 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 IFI6P09912 130 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 NPIPA8P0DM63 369 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 COX5AP20674 150 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 IMPDH1P20839 514 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 ATP5F1P24539 256 aaPredicted RBP12.94□□□□□ -0.34
PNKP-218ENST00000625299 PTAFRP25105 342 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 CD40P25942 277 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 MAP3K8P41279 467 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 SERPINB4P48594 390 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 EFNA4P52798 201 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 TOMM34Q15785 309 aaPredicted RBP12.94□□□□□ -0.34
PNKP-218ENST00000625299 CARTPTQ16568 116 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 LIPNQ5VXI9 398 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 NOXRED1Q6NXP6 359 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 SSX8Q7RTT4 187 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 P2RY8Q86VZ1 359 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
PNKP-218ENST00000625299 ZFP28Q8NHY6 868 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms