RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GTPBP1O00178 669 aaKnown RBP16.86■□□□□ 0.29
SMN1-211ENST00000625245 SOX30O94993 753 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 CHEK2O96017 543 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 HMGN2P05204 90 aaKnown RBP16.86■□□□□ 0.29
SMN1-211ENST00000625245 YES1P07947 543 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 NEFHP12036 1026 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 ELK4P28324 431 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 ASMTP46597 345 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 FAPQ12884 760 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 CBLN3Q6UW01 205 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 R3HCC1LQ7Z5L2 792 aaKnown RBP16.86■□□□□ 0.29
SMN1-211ENST00000625245 ATG4DQ86TL0 474 aaPredicted RBP16.86■□□□□ 0.29
SMN1-211ENST00000625245 C10orf107Q8IVU9 208 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 DDIASQ8IXT1 998 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 BANPQ8N9N5 519 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 ZNF527Q8NB42 609 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 SPATA3Q8NHX4 192 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 RFWD2Q8NHY2 731 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 TXLNGYQ9BZA5 131 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 SIRT3Q9NTG7 399 aaPredicted RBP16.86■□□□□ 0.29
SMN1-211ENST00000625245 LIPT1Q9Y234 373 aa16.86■□□□□ 0.29
SMN1-211ENST00000625245 IGHV3-15A0A0B4J1V0 119 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 H3BNH8 94 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 COPEO14579 308 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 TP53P04637 393 aaPredicted RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 BCKDHAP12694 445 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 DDX5P17844 614 aaKnown RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 ENPP1P22413 925 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 ADH6P28332 368 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 ACVR1BP36896 505 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 HPCAL1P37235 193 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 P2RX1P51575 399 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 TOMM34Q15785 309 aaPredicted RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 ETFDHQ16134 617 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 EXOSC6Q5RKV6 272 aaKnown RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 HEPHL1Q6MZM0 1159 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 CDC73Q6P1J9 531 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 MTERF4Q7Z6M4 381 aaKnown RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 ZNF614Q8N883 585 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 MTERF3Q96E29 417 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 STACQ99469 402 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 RHOXF2Q9BQY4 288 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 GATA5Q9BWX5 397 aaPredicted RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 HOXD1Q9GZZ0 328 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 PIGUQ9H490 435 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 DUSP22Q9NRW4 184 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 TMED5Q9Y3A6 229 aa16.85■□□□□ 0.29
SMN1-211ENST00000625245 MAGED1Q9Y5V3 778 aaPredicted RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 GPC6Q9Y625 555 aaPredicted RBP16.85■□□□□ 0.29
SMN1-211ENST00000625245 ATRQ13535 2644 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 FBN3Q75N90 2809 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ALPK2Q86TB3 2170 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 C9JVG2 144 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 LSM1O15116 133 aaKnown RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 DANCRP0C864 163 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 SLC7A1P30825 629 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 BSPH1Q075Z2 132 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ITGADQ13349 1161 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 TP53BP2Q13625 1128 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 P2RY6Q15077 328 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 STK11Q15831 433 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 NDUFAF6Q330K2 333 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ZNF672Q499Z4 452 aaPredicted RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 KLHL26Q53HC5 615 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 BHLHA15Q7RTS1 189 aaPredicted RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 GSPT2Q8IYD1 628 aaKnown RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 KBTBD8Q8NFY9 601 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 OR7A2PQ8NGA2 310 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 PIWIL2Q8TC59 973 aaKnown RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 GPR119Q8TDV5 335 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ADAMTS15Q8TE58 950 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ZFP90Q8TF47 636 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ZNF775Q96BV0 537 aaPredicted RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 COQ10BQ9H8M1 238 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 ICAM5Q9UMF0 924 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 FAF1Q9UNN5 650 aaPredicted RBP16.84■□□□□ 0.29
SMN1-211ENST00000625245 DNAJC15Q9Y5T4 150 aa16.84■□□□□ 0.29
SMN1-211ENST00000625245 A0A1W2PNR3 127 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 DPRXA6NFQ7 191 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 ZNF814B7Z6K7 855 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 SHBGP04278 402 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 FESP07332 822 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 LAMP1P11279 417 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 CCT3P49368 545 aaKnown RBP16.83■□□□□ 0.28
SMN1-211ENST00000625245 CCR4P51679 360 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 MLC1Q15049 377 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 SPDYE7PQ495Y7 208 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 DCST2Q5T1A1 773 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 KANK2Q63ZY3 851 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 C4orf33Q8N1A6 199 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 SLC43A2Q8N370 569 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 TMCO5AQ8N6Q1 288 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 ACTRT3Q9BYD9 372 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 POTEKPQ9BYX7 375 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 SLCO5A1Q9H2Y9 848 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 ALG2Q9H553 416 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 GP6Q9HCN6 339 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 YAE1D1Q9NRH1 226 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 GIMAP2Q9UG22 337 aa16.83■□□□□ 0.28
SMN1-211ENST00000625245 ATP6V1HQ9UI12 483 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms