RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 THUMPD1Q9NXG2 353 aaKnown RBP11.2□□□□□ -0.62
LINC00963-217ENST00000624009 VDAC3Q9Y277 283 aa11.2□□□□□ -0.62
LINC00963-217ENST00000624009 SLC35A3Q9Y2D2 325 aa11.2□□□□□ -0.62
LINC00963-217ENST00000624009 AKAP9Q99996 3911 aa11.2□□□□□ -0.62
LINC00963-217ENST00000624009 CADP27708 2225 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 A0A1W2PNV4 684 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 FAM221AA4D161 298 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 H3BML4 177 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 GTPBP1O00178 669 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 HMGN4O00479 90 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 RFXANKO14593 260 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 POLR3GO15318 223 aaPredicted RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 KRT75O95678 551 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 TGM6O95932 706 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 PABPC4LP0CB38 370 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 UBL4AP11441 157 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 FKBP2P26885 142 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 KIR2DL3P43628 341 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 CLDN20P56880 219 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 HPCAP84074 193 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 SKP2Q13309 424 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 CBFBQ13951 182 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 DAZAP2Q15038 168 aaPredicted RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 CTU2Q2VPK5 515 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 NXNQ6DKJ4 435 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 TYW3Q6IPR3 259 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 CBLN3Q6UW01 205 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 EIF3MQ7L2H7 374 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 P4HA3Q7Z4N8 544 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 ZNF619Q8N2I2 560 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 MIER2Q8N344 545 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 GATSQ8NAP1 163 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 XAGE5Q8WWM1 108 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 ZBTB9Q96C00 473 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 ROPN1LQ96C74 230 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 SIKE1Q9BRV8 207 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 PINK1Q9BXM7 581 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 GP6Q9HCN6 339 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 TIGARQ9NQ88 270 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 TCF7L2Q9NQB0 619 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 EXOSC3Q9NQT5 275 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 MCTS1Q9ULC4 181 aaKnown RBP11.19□□□□□ -0.62
LINC00963-217ENST00000624009 WDR45Q9Y484 360 aa11.19□□□□□ -0.62
LINC00963-217ENST00000624009 FAM234BA2RU67 622 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 A8MXE2 369 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 SEC14L5O43304 696 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 FCMRO60667 390 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 DIAPH2O60879 1101 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 UGT2B17O75795 530 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 OR12D1P0DN82 309 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 CD8BP10966 210 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 PRKCAP17252 672 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 IL11P20809 199 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 UQCRC1P31930 480 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 POLR2JP52435 117 aaKnown RBP11.18□□□□□ -0.62
LINC00963-217ENST00000624009 FUT5Q11128 374 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 FOXF2Q12947 444 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 MYBPHQ13203 477 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 PON3Q15166 354 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 GPR68Q15743 365 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 ZSWIM7Q19AV6 140 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 PDZK1Q5T2W1 519 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 GTF2IRD2BQ6EKJ0 949 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 FRRS1Q6ZNA5 592 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 LRRC74BQ6ZQY2 392 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 GTF2IRD2Q86UP8 949 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 UBQLNLQ8IYU4 475 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 FNDC9Q8TBE3 224 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 POC1BQ8TC44 478 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 DYDC1Q8WWB3 177 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 SH3YL1Q96HL8 342 aaPredicted RBP11.18□□□□□ -0.62
LINC00963-217ENST00000624009 GMPPAQ96IJ6 420 aaPredicted RBP11.18□□□□□ -0.62
LINC00963-217ENST00000624009 ITCHQ96J02 903 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 RNF145Q96MT1 663 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 OR52B2Q96RD2 323 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 INTS9Q9NV88 658 aaKnown RBP11.18□□□□□ -0.62
LINC00963-217ENST00000624009 ELOVL5Q9NYP7 299 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 KCNE5Q9UJ90 142 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 CARD8Q9Y2G2 431 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 GMEB1Q9Y692 573 aa11.18□□□□□ -0.62
LINC00963-217ENST00000624009 PRRC2AP48634 2157 aaKnown RBP11.18□□□□□ -0.62
LINC00963-217ENST00000624009 TUBAL3A6NHL2 446 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 EEF1E1-BLOC1S5C9J1V9 151 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 EIF1AYO14602 144 aaKnown RBP11.17□□□□□ -0.62
LINC00963-217ENST00000624009 EEF1E1O43324 174 aaKnown RBP11.17□□□□□ -0.62
LINC00963-217ENST00000624009 CSTAP01040 98 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 EPXP11678 715 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 NID1P14543 1247 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 PGCP20142 388 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 TCEA1P23193 301 aaKnown RBP11.17□□□□□ -0.62
LINC00963-217ENST00000624009 PGM1P36871 562 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 KIR2DL2P43627 348 aaPredicted RBP11.17□□□□□ -0.62
LINC00963-217ENST00000624009 SLC6A8P48029 635 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 ATP4BP51164 291 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 MAP2K6P52564 334 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 NME5P56597 212 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 STX1BP61266 288 aa11.17□□□□□ -0.62
LINC00963-217ENST00000624009 SELENBP1Q13228 472 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms