RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 C18orf63Q68DL7 685 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 LRFN4Q6PJG9 635 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 SERPINA12Q8IW75 414 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 LAS2Q8IYD9 372 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 OR52I1Q8NGK6 324 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 OR52N1Q8NH53 320 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 OR14C36Q8NHC7 312 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 RNF39Q9H2S5 420 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 PARPBPQ9NWS1 579 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 CNIH4Q9P003 139 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 ZNF629Q9UEG4 869 aaPredicted RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 NDRG4Q9ULP0 352 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 WIF1Q9Y5W5 379 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 A0A1B0GV50 99 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 GLOD5A6NK44 160 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TMEM200CA6NKL6 621 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 DUSP11O75319 330 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 ZXDBP98169 803 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 GPR176Q14439 515 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 AWAT2Q6E213 333 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 OR52H1Q8NGJ2 320 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 RAB39BQ96DA2 213 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 RRNAD1Q96FB5 475 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 GKN1Q9NS71 199 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 ACTL7AQ9Y615 435 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 GABRR3A8MPY1 467 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 RGS11O94810 467 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 HBE1P02100 147 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 ARAFP10398 606 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 SLC2A5P22732 501 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 SEC61A1P61619 476 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 GALK2Q01415 458 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 EXOSC2Q13868 293 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 GGTA1PQ4G0N0 100 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 HIST2H3PS2Q5TEC6 136 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 H3F3CQ6NXT2 135 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TEX261Q6UWH6 196 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TP53INP2Q8IXH6 220 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 IGSF8Q969P0 613 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 HAPLN2Q9GZV7 340 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 SLC7A7Q9UM01 511 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 U3KQ87 197 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TRABD2BA6NFA1 517 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 A8MUA0 341 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 NDUFA6P56556 154 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 CLRN1P58418 232 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 GHRHRQ02643 423 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TANGO2Q6ICL3 276 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 NDUFAF7Q7L592 441 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 BPIFB2Q8N4F0 458 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TMEM234Q8WY98 164 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TRIB2Q92519 343 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 NRIP3Q9NQ35 241 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 PNO1Q9NRX1 252 aaKnown RBP8.39□□□□□ -1.07
VCL-206ENST00000623461 USP22Q9UPT9 525 aa8.39□□□□□ -1.07
VCL-206ENST00000623461 TRBV23OR9-2A0A075B6M9 112 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 H7BY64 318 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 E2F3O00716 465 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SCGB1D1O95968 90 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SELPP16109 830 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 PTNP21246 168 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CNR1P21554 472 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 MFSD13AQ14CX5 517 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 IL20RBQ6UXL0 311 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 DUSP19Q8WTR2 217 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ST8SIA2Q92186 375 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ISYNA1Q9NPH2 558 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ZNF281Q9Y2X9 895 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SNX11Q9Y5W9 270 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 TSPAN6O43657 245 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 LDB2O43679 373 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 OR2F2O95006 317 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 HTR3BO95264 441 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 PPT1P50897 306 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SP3Q02447 781 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 OR2F1Q13607 317 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 NRSN1Q8IZ57 195 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 F2RL3Q96RI0 385 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 DPH1Q9BZG8 443 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 AMBRA1Q9C0C7 1298 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SLCO5A1Q9H2Y9 848 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 SCML1Q9UN30 329 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 FAM110CQ1W6H9 321 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SAXO2Q658L1 398 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 FCRLAQ7L513 359 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CBARPQ8N350 705 aaPredicted RBP8.38□□□□□ -1.07
VCL-206ENST00000623461 TMEM239Q8WW34 195 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 FRZBQ92765 325 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 INIPQ9NRY2 104 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 CACNG4Q9UBN1 327 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 SLC7A11Q9UPY5 501 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 ADAMTSL3P82987 1691 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 A6NIN4 97 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 TGOLN2O43493 480 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 GRPRP30550 384 aa8.38□□□□□ -1.07
VCL-206ENST00000623461 BLKP51451 505 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms