RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 UBL3O95164 117 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 LRATO95237 230 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PDYNP01213 254 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 SRPRAP08240 638 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 HCKP08631 526 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 EDN3P14138 238 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PAX1P15863 534 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 GPX2P18283 190 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 CERS1P27544 350 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PDHA2P29803 388 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ETV5P41161 510 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 STAT5AP42229 794 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 CRATP43155 626 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 MTNR1BP49286 362 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 SRP9P49458 86 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 PPT1P50897 306 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 DLX5P56178 289 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 RHOAP61586 193 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PPIAP62937 165 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 NFATC2Q13469 925 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 KLF9Q13886 244 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 BOP1Q14137 746 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 CPSF6Q16630 551 aaKnown RBP eCLIP7□□□□□ -1.29
TRIM49B-202ENST00000622138 TCTN1Q2MV58 587 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF626Q68DY1 528 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PAQR6Q6TCH4 344 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TMIGD1Q6UXZ0 262 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 CHST9Q7L1S5 443 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PTOV1Q86YD1 416 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 RNF175Q8N4F7 328 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 HDDC3Q8N4P3 179 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ZBTB2Q8N680 514 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ZSCAN1Q8NBB4 408 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 RELL2Q8NC24 303 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 FAM98AQ8NCA5 519 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 OR52I1Q8NGK6 324 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 OR8J1Q8NGP2 316 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 XAGE5Q8WWM1 108 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 ACOT11Q8WXI4 607 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 VOPP1Q96AW1 172 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TPD52L3Q96J77 140 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TSSK3Q96PN8 268 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 SPSB2Q99619 263 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 GINS4Q9BRT9 223 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 UTP23Q9BRU9 249 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 NTMT1Q9BV86 223 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 IL26Q9NPH9 171 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TMEM138Q9NPI0 162 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 CA10Q9NS85 328 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 TMEM184CQ9NVA4 438 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 DNAJC27Q9NZQ0 273 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 OPN4Q9UHM6 478 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 MBD1Q9UIS9 605 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 EXOSC1Q9Y3B2 195 aaKnown RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 PCDHB1Q9Y5F3 818 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PCDHGA5Q9Y5G8 931 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 PCDHGA1Q9Y5H4 931 aa7□□□□□ -1.29
TRIM49B-202ENST00000622138 NUP214P35658 2090 aaPredicted RBP7□□□□□ -1.29
TRIM49B-202ENST00000622138 KCNE1BA0A087WTH5 132 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 FXYD6-FXYD2A0A087WZ82 144 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ABHD14A-ACY1A0A1B0GW23 586 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 UPK3BL1B0FP48 263 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 UPK3BL2E5RIL1 263 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 LRRN3E7EW58 273 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 RFXAPO00287 272 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 GABRPO00591 440 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 BCAT2O15382 392 aaPredicted RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 UGDHO60701 494 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 PRAMEF4O60810 478 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 KCNK5O95279 499 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CLDN7O95471 211 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 IGF2P01344 180 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 MT-ND4LP03901 98 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CD2P06729 351 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 EIF4EP06730 217 aaKnown RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF35P13682 527 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ADRB3P13945 408 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 HIST1H1BP16401 226 aaKnown RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF14P17017 642 aaPredicted RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 HMGA1P17096 107 aaKnown RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 SDC1P18827 310 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 NOS3P29474 1203 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 VIPR1P32241 457 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 LIMS1P48059 325 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 FLT3LGP49771 235 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 MECP2P51608 486 aaKnown RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF157P51786 506 aaPredicted RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CDH12P55289 794 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CLN3Q13286 438 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CDKN3Q16667 212 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 SAPCD1Q5SSQ6 148 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 PRAMEF9Q5VWM5 478 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 MFSD14CQ5VZR4 134 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 CRTC1Q6UUV9 634 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 TGIF2LXQ8IUE1 241 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 ZNF383Q8NA42 475 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 TRMT10AQ8TBZ6 339 aaKnown RBP6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 PXYLP1Q8TE99 480 aa6.99□□□□□ -1.29
TRIM49B-202ENST00000622138 HIST1H2BAQ96A08 127 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms