RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GJB2P29033 226 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 NMT1P30419 496 aaKnown RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 AXLP30530 894 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ID1P41134 155 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 RPL34P49207 117 aaKnown RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 FKBP1BP68106 108 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 XIAPP98170 497 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 NCBP1Q09161 790 aaKnown RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 USF2Q15853 346 aaPredicted RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 BCL2A1Q16548 175 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF311Q5JNZ3 666 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 PRAMEF5Q5TYX0 476 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 AGBL2Q5U5Z8 902 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 PRAMEF6Q5VXH4 476 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 OLFML2AQ68BL7 652 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 TPGS1Q6ZTW0 290 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ASPGQ86U10 573 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CACUL1Q86Y37 369 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM126BQ8IUX1 230 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 GCNT2Q8N0V5 402 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ELMOD1Q8N336 334 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 TRPV3Q8NET8 790 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ANGPTL6Q8NI99 470 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CD300LFQ8TDQ1 290 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 GLYATL2Q8WU03 294 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ASZ1Q8WWH4 475 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 C4orf36Q96KX1 117 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 OSBPL10Q9BXB5 764 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 SPATA16Q9BXB7 569 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 OR52A5Q9H2C5 316 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 RHBGQ9H310 441 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 RGCCQ9H4X1 137 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 MEAF6Q9HAF1 191 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ZFP14Q9HCL3 533 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 S100A14Q9HCY8 104 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 MED17Q9NVC6 651 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ERVK-18Q9QC07 812 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ATPIF1Q9UII2 106 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 TMED7Q9Y3B3 224 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 BZW2Q9Y6E2 419 aaKnown RBP3.11□□□□□ -1.91
BRCA1-229ENST00000621897 ABCC4O15439 1325 aa3.11□□□□□ -1.91
BRCA1-229ENST00000621897 CUX2O14529 1486 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TRAV25A0A0B4J276 109 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 A0A0U1RRA0 63 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ARHGEF35A5YM69 484 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ANKRD30BLA7E2S9 258 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 H0YHG0 523 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 H0YIG0 161 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 GOLGA8TH3BQL2 631 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 NME2P1O60361 137 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 CLN5O75503 358 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 OR4F21O95013 312 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 GAS8O95995 478 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 GLAP06280 429 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 LYNP07948 512 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PLEKP08567 350 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RRASP10301 218 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 MX1P20591 662 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 DLSTP36957 453 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 GPR4P46093 362 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 NSFP46459 744 aaKnown RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ACADVLP49748 655 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 NUMBP49757 651 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RGS4P49798 205 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PPT1P50897 306 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RAB9AP51151 201 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 SLC34A1Q06495 639 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 SELPLGQ14242 412 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 RFTN1Q14699 578 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 STK38Q15208 465 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 CARTPTQ16568 116 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 C17orf58Q2M2W7 97 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PARP6Q2NL67 630 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ADPRMQ3LIE5 342 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 CCDC14Q49A88 953 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ATF7IP2Q5U623 682 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 REP15Q6BDI9 236 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 PTRHD1Q6GMV3 140 aaKnown RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 CGB2Q6NT52 195 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TTC23LQ6PF05 361 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 FAM159AQ6UWV7 190 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TMEM64Q6YI46 380 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 VTCN1Q7Z7D3 282 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 KIAA1328Q86T90 577 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 LUZP2Q86TE4 346 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ANKRD46Q86W74 232 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 UBQLNLQ8IYU4 475 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ASCC1Q8N9N2 400 aaKnown RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 OR4C5Q8NGB2 326 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF461Q8TAF7 563 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 TRMT10AQ8TBZ6 339 aaKnown RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 SEPT8Q92599 483 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 FAM46BQ96A09 425 aa3.1□□□□□ -1.91
BRCA1-229ENST00000621897 ZNF707Q96C28 371 aaPredicted RBP3.1□□□□□ -1.91
BRCA1-229ENST00000621897 NTNG2Q96CW9 530 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms