RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 NPLQ9BXD5 320 aaPredicted RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 SAP130Q9H0E3 1048 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF226Q9NYT6 803 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 AP3M1Q9Y2T2 418 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CACNA1BQ00975 2339 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CEP192Q8TEP8 1941 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 PTHP01270 115 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 NGFRP08138 427 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GPR3P46089 330 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GABRA4P48169 554 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 CLK1P49759 484 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 ERVK-25P63136 954 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 SKP1P63208 163 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GPLD1P80108 840 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 DCDP81605 110 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 DOC2BQ14184 412 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 BROXQ5VW32 411 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GTF2IRD2BQ6EKJ0 949 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 GTF2IRD2Q86UP8 949 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 IL22RA1Q8N6P7 574 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 FAM98AQ8NCA5 519 aaKnown RBP9.69□□□□□ -0.86
VPS11-208ENST00000621676 DIO2Q92813 273 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 ZNF160Q9HCG1 818 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 VCX3AQ9NNX9 186 aa9.69□□□□□ -0.86
VPS11-208ENST00000621676 DIDO1Q9BTC0 2240 aaKnown RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 PLOD3O60568 738 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 ANXA8P13928 327 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GIPRP48546 466 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 CAV3P56539 151 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 PLAURQ03405 335 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GLYR1Q49A26 553 aaPredicted RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 LINC00696Q6ZRV3 163 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 RAB11FIP2Q7L804 512 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 D2HGDHQ8N465 521 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 APH1BQ8WW43 257 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 THAP11Q96EK4 314 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 VSTM2LQ96N03 204 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 TRIM45Q9H8W5 580 aaPredicted RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 BATF3Q9NR55 127 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 ALKBH4Q9NXW9 302 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 PTGFRNQ9P2B2 879 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 ANKRD61A6NGH8 418 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 PRAMEF2O60811 474 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 UTS2O95399 124 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 FCER2P06734 321 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 SYPP08247 313 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 BMP7P18075 431 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 SDHBP21912 280 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 MAGEB1P43366 347 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 SQSTM1Q13501 440 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GPAT4Q86UL3 456 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 RANBP3LQ86VV4 465 aaPredicted RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 RBM12BQ8IXT5 1001 aaKnown RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 ZNF595Q8IYB9 648 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 PIGXQ8TBF5 258 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GGHQ92820 318 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 OMA1Q96E52 524 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GNRHR2Q96P88 292 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 SARGQ9BW04 601 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 MRPS26Q9BYN8 205 aaKnown RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 LUZP4Q9P127 313 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 GPN3Q9UHW5 284 aaPredicted RBP9.68□□□□□ -0.86
VPS11-208ENST00000621676 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 EML5Q05BV3 1969 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
VPS11-208ENST00000621676 A0A1B0GVC2 190 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 A6NIN4 97 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 D6RAR5 112 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 H0YC42 278 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 RGS10O43665 173 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 C7P10643 843 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ABCD3P28288 659 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 SLC37A1P57057 533 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 C21orf58P58505 322 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 LIPKQ5VXJ0 399 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ARSKQ6UWY0 536 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 VASH2Q86V25 355 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 AGBL5Q8NDL9 886 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR10H4Q8NGA5 316 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR10G3Q8NGC4 313 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 TMEM239Q8WW34 195 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 RASD2Q96D21 266 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 BPIFA2Q96DR5 249 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ZMYND19Q96E35 227 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 RDH12Q96NR8 316 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 LPAR4Q99677 370 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 BTBD2Q9BX70 525 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR51E2Q9H255 320 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 MEPEQ9NQ76 525 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 H2AFY2Q9P0M6 372 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 TVP23AA6NH52 213 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 BRINP1O60477 761 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 CER1O95813 267 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 HLA-DQA2P01906 255 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 NID1P14543 1247 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 RORAP35398 523 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 AQP2P41181 271 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 EIF1AXP47813 144 aaKnown RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 ZNF136P52737 540 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms