RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CMTM6Q9NX76 183 aa16.84■□□□□ 0.29
CIRBP-245ENST00000621399 SH3BGRL2Q9UJC5 107 aa16.84■□□□□ 0.29
CIRBP-245ENST00000621399 ZNF443Q9Y2A4 671 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-245ENST00000621399 AP3M1Q9Y2T2 418 aa16.84■□□□□ 0.29
CIRBP-245ENST00000621399 UBR5O95071 2799 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-245ENST00000621399 BCAS1O75363 584 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 SERPINB7O75635 380 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 PABPC4LP0CB38 370 aaKnown RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 SLC7A2P52569 658 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 GFRA1P56159 465 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 B3GALT5-AS1P59052 145 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 PSME3P61289 254 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 KCNC4Q03721 635 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 CRYZQ08257 329 aaKnown RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 C3AR1Q16581 482 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 VMACQ2NL98 169 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 MRPL2Q5T653 305 aaKnown RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 C1QL3Q5VWW1 255 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 VASNQ6EMK4 673 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 C8orf82Q6P1X6 216 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF836Q6ZNA1 936 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 CD163Q86VB7 1156 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 CALHM3Q86XJ0 350 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 DOLPP1Q86YN1 238 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 SLC15A3Q8IY34 581 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 FAM71CQ8NEG0 241 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 GPR119Q8TDV5 335 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 ZBTB8AQ96BR9 441 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 ARSGQ96EG1 525 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 REXO5Q96IC2 774 aaKnown RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF583Q96ND8 569 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 TIMP4Q99727 224 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 EXOSC3Q9NQT5 275 aaKnown RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 PNPLA3Q9NST1 481 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 RLIMQ9NVW2 624 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 TINAGQ9UJW2 476 aa16.83■□□□□ 0.28
CIRBP-245ENST00000621399 GPC6Q9Y625 555 aaPredicted RBP16.83■□□□□ 0.28
CIRBP-245ENST00000621399 TENM4Q6N022 2769 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 OR2M5A3KFT3 312 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 CDHR4A6H8M9 788 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 CCT8L1PA6NM43 557 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 SHISA8B8ZZ34 492 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ESRRAP11474 423 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-245ENST00000621399 CHMP24386 653 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 RYKP34925 604 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 PCGF2P35227 344 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 MNAT1P51948 309 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 EEF1A1P68104 462 aaKnown RBP16.82■□□□□ 0.28
CIRBP-245ENST00000621399 TOMM34Q15785 309 aaPredicted RBP16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ZSWIM7Q19AV6 140 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 PLPPR5Q32ZL2 321 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF585AQ6P3V2 769 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ERICH5Q6P6B1 374 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ENPP6Q6UWR7 440 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 NSL1Q96IY1 281 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 DNAJB12Q9NXW2 375 aaKnown RBP16.82■□□□□ 0.28
CIRBP-245ENST00000621399 ALKBH4Q9NXW9 302 aa16.82■□□□□ 0.28
CIRBP-245ENST00000621399 NCKAP5O14513 1909 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 PRORSD1PA6NEY8 169 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 FAM220BPB1ANY3 271 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 LINC01387J3KSC0 135 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 LRRTM2O43300 516 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF17P17021 662 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 PGCP20142 388 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 EIF1P41567 113 aaKnown RBP16.81■□□□□ 0.28
CIRBP-245ENST00000621399 CA7P43166 264 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 SLC6A8P48029 635 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 STARP49675 285 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 PCBP3P57721 371 aaKnown RBP16.81■□□□□ 0.28
CIRBP-245ENST00000621399 MXRA7P84157 204 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 PLAURQ03405 335 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 LIPEQ05469 1076 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 QPRTQ15274 297 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 EMC4Q5J8M3 183 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 DCST1Q5T197 706 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 INTS11Q5TA45 600 aaKnown RBP16.81■□□□□ 0.28
CIRBP-245ENST00000621399 RNF220Q5VTB9 566 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 C3P1Q6ZMU1 363 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 ARMC8Q8IUR7 673 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 CLIP4Q8N3C7 705 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 GTPBP8Q8N3Z3 284 aaPredicted RBP16.81■□□□□ 0.28
CIRBP-245ENST00000621399 OR2T12Q8NG77 320 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 USP22Q9UPT9 525 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 CAMK2AQ9UQM7 478 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF337Q9Y3M9 751 aa16.81■□□□□ 0.28
CIRBP-245ENST00000621399 A0A1B0GUH1 482 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 C7orf72A4D263 438 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 M0QX08 132 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 CCL21O00585 134 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 NME4O00746 187 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 DNAJA2O60884 412 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 PRKCAP17252 672 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 POU3F2P20265 443 aaPredicted RBP16.8■□□□□ 0.28
CIRBP-245ENST00000621399 PRKAR1BP31321 381 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 FOXF1Q12946 379 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 TMEM44Q2T9K0 475 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 C4orf17Q53FE4 359 aa16.8■□□□□ 0.28
CIRBP-245ENST00000621399 PATL1Q86TB9 770 aaKnown RBP16.8■□□□□ 0.28
CIRBP-245ENST00000621399 ZNF440Q8IYI8 595 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms