RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RBM38Q9H0Z9 239 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 NOL11Q9H8H0 719 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 PFDN4Q9NQP4 134 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PPP4R1LQ9P1A2 415 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZNF639Q9UID6 485 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PROCRQ9UNN8 238 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MRPS18CQ9Y3D5 142 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZNF780BQ9Y6R6 833 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PRR14LQ5THK1 2151 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 NBEAL1Q6ZS30 2694 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SMIM31A0A1B0GVY4 71 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 H0YC42 278 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 H3BML4 177 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TO15178 435 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TNFRSF21O75509 655 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SIX3O95343 332 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 CGAP01215 116 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 RBP1P09455 135 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PCSK2P16519 638 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TBXA2RP21731 343 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TPD52P55327 224 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 DSCR4P56555 118 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 MYBPC1Q00872 1141 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MGAT2Q10469 447 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRAP1Q12931 704 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 LSAMPQ13449 338 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 EFR3AQ14156 821 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRIM25Q14258 630 aaKnown RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 SGO1Q5FBB7 561 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FAM219BQ5XKK7 198 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 HEPHL1Q6MZM0 1159 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PPP4R4Q6NUP7 873 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PODNL1Q6PEZ8 512 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 C22orf34Q6ZV56 151 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 COMMD6Q7Z4G1 85 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 FUNDC1Q8IVP5 155 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ICA1LQ8NDH6 482 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 OR52B6Q8NGF0 335 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRPC4APQ8TEL6 797 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ASB9Q96DX5 294 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SLC35A4Q96G79 324 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 SH3GL3Q99963 347 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRMOQ9BU70 441 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ELOVL6Q9H5J4 265 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 MRGBPQ9NV56 204 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 ZNF701Q9NV72 531 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 TMEM181Q9P2C4 612 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 LAMP3Q9UQV4 416 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 GPR55Q9Y2T6 319 aaPredicted RBP7.04□□□□□ -1.28
CLK1-215ENST00000621181 TRAF6Q9Y4K3 522 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PCDHA9Q9Y5H5 950 aa7.04□□□□□ -1.28
CLK1-215ENST00000621181 PRORSD1PA6NEY8 169 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 HS3ST1O14792 307 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 CFLARO15519 480 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 SCO2O43819 266 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 TMCC2O75069 709 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 PLGP00747 810 aaPredicted RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 FGF4P08620 206 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 FCGR2AP12318 317 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 PAX1P15863 534 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 PPP3CBP16298 524 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 LOXP28300 417 aaPredicted RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 GK3PQ14409 553 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 SGCBQ16585 318 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 CLEC12BQ2HXU8 276 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 GRAMD1BQ3KR37 738 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 LINC01559Q495D7 138 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 C6orf10Q5SRN2 563 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 ZNF678Q5SXM1 525 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 C10orf62Q5T681 223 aaPredicted RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 IL23RQ5VWK5 629 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 REP15Q6BDI9 236 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 NXNQ6DKJ4 435 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 METTL2BQ6P1Q9 378 aaKnown RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 RPS27LQ71UM5 84 aaKnown RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 SLC22A9Q8IVM8 553 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 METTL4Q8N3J2 472 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 RNF148Q8N7C7 305 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 GFM2Q969S9 779 aaKnown RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 EFHD2Q96C19 240 aaPredicted RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 PHF21BQ96EK2 531 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 CNRIP1Q96F85 164 aaPredicted RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 PLPPR2Q96GM1 343 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 FAIM2Q9BWQ8 316 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 ANKRA2Q9H9E1 313 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 EML4Q9HC35 981 aaKnown RBP7.03□□□□□ -1.28
CLK1-215ENST00000621181 SLC52A3Q9NQ40 469 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 UTS2RQ9UKP6 389 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 CES1P1Q9UKY3 287 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 ZNF175Q9Y473 711 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 OR10H1Q9Y4A9 318 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 AP4B1Q9Y6B7 739 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 COMMD3-BMI1R4GMX3 469 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 CUBNO60494 3623 aa7.03□□□□□ -1.28
CLK1-215ENST00000621181 C7orf72A4D263 438 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 C17orf51A8MQB3 221 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 B4DXG7 233 aa7.02□□□□□ -1.29
CLK1-215ENST00000621181 OR7A17O14581 309 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms