RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 CH25HO95992 272 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 HMGN1P05114 100 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 HSMCR30P0CW71 290 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 RGS6P49758 472 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 MED22Q15528 200 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 KLHL22Q53GT1 634 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 ALG10BQ5I7T1 473 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 RABEPKQ7Z6M1 372 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 SLC34A3Q8N130 599 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 ANKK1Q8NFD2 765 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 NDNFQ8TB73 568 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 RPL3LQ92901 407 aaKnown RBP17.54■□□□□ 0.4
PSPC1-206ENST00000619300 DAZLQ92904 295 aaKnown RBP17.54■□□□□ 0.4
PSPC1-206ENST00000619300 NAT6Q93015 286 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 ADIPOR1Q96A54 375 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 LCORQ96JN0 433 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-206ENST00000619300 ZNF426Q9BUY5 554 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 SLC7A5P2Q9GIP4 190 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 UBQLN3Q9H347 655 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 HHATLQ9HCP6 504 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 MEPEQ9NQ76 525 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-206ENST00000619300 UBQLN4Q9NRR5 601 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 MRPS18AQ9NVS2 196 aaKnown RBP17.54■□□□□ 0.4
PSPC1-206ENST00000619300 IL20RAQ9UHF4 553 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 CLEC2DQ9UHP7 191 aa17.54■□□□□ 0.4
PSPC1-206ENST00000619300 PI4KAP42356 2102 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 TNRC6BQ9UPQ9 1833 aaKnown RBP17.53■□□□□ 0.4
PSPC1-206ENST00000619300 IGHV5-10-1A0A0J9YXX1 117 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 FRG2CA6NGY1 282 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 KDM4EB2RXH2 506 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-206ENST00000619300 CLPXO76031 633 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 RBM34P42696 430 aaKnown RBP17.53■□□□□ 0.4
PSPC1-206ENST00000619300 MLLT10P55197 1068 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 NCS1P62166 190 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 ULK3Q6PHR2 472 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 LSRQ86X29 649 aaPredicted RBP17.53■□□□□ 0.4
PSPC1-206ENST00000619300 SLITRK4Q8IW52 837 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 CACTIN-AS1Q8N1I8 211 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 OR52I1Q8NGK6 324 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 OR14A16Q8NHC5 309 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 OIT3Q8WWZ8 545 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 PLEKHA8Q96JA3 519 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 MGLLQ99685 303 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 NUDT9Q9BW91 350 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 OR52D1Q9H346 318 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 SLC22A11Q9NSA0 550 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 SLC35A3Q9Y2D2 325 aa17.53■□□□□ 0.4
PSPC1-206ENST00000619300 EFCAB9A8MZ26 197 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 AIREO43918 545 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 ZGLP1P0C6A0 271 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 FUT1P19526 365 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 DCAF7P61962 342 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 NDUFAF6Q330K2 333 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 LINC00114Q6XXX2 140 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 HSDL2Q6YN16 418 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 BMP8AQ7Z5Y6 402 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 CADM2Q8N3J6 435 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 PLPP5Q8NEB5 264 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 ART5Q96L15 291 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 OR6C1Q96RD1 312 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 TGIF2Q9GZN2 237 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 RPS6KB2Q9UBS0 482 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 CTSFQ9UBX1 484 aa17.52■□□□□ 0.4
PSPC1-206ENST00000619300 MRTO4Q9UKD2 239 aaKnown RBP17.52■□□□□ 0.4
PSPC1-206ENST00000619300 DIMT1Q9UNQ2 313 aaKnown RBP17.52■□□□□ 0.4
PSPC1-206ENST00000619300 C2orf92A0A1B0GVN3 265 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 RFPL3O75679 317 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 RCBTB2O95199 551 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 CKMT1AP12532 417 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 BMP7P18075 431 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 GADD45AP24522 165 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 HOXD12P35452 270 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 ADH7P40394 386 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 FXYD6P3P58550 94 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 DCTN2Q13561 401 aaKnown RBP17.52■□□□□ 0.39
PSPC1-206ENST00000619300 RPL13AP3Q6NVV1 102 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 COX15Q7KZN9 410 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 ZNF440Q8IYI8 595 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 NANOGP1Q8N7R0 232 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 ZNF527Q8NB42 609 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 CEP76Q8TAP6 659 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 FANK1Q8TC84 345 aa17.52■□□□□ 0.39
PSPC1-206ENST00000619300 LSM2Q9Y333 95 aaKnown RBP17.52■□□□□ 0.39
PSPC1-206ENST00000619300 IRGMA1A4Y4 181 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 PATE3B3GLJ2 98 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 RAB36O95755 333 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 SAGP10523 405 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-206ENST00000619300 HPGDP15428 266 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 TBXA2RP21731 343 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 CLK1P49759 484 aaKnown RBP17.51■□□□□ 0.39
PSPC1-206ENST00000619300 ENTPD1P49961 510 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 GAS1P54826 345 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 RAB40BQ12829 278 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 MOGQ16653 247 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 TMEM44Q2T9K0 475 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 AADACL4Q5VUY2 407 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 KIRREL2Q6UWL6 708 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 PROKR2Q8NFJ6 384 aa17.51■□□□□ 0.39
PSPC1-206ENST00000619300 OR52L1Q8NGH7 329 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms