RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CCKBRP32239 447 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 LIPAP38571 399 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 NR0B1P51843 470 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 PSMD4P55036 377 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 NCS1P62166 190 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 PSPHP78330 225 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 ILKQ13418 452 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 DOC2BQ14184 412 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 FGFBP1Q14512 234 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF141Q15928 474 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF385CQ66K41 422 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 FAM199XQ6PEV8 388 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC29A4Q7RTT9 530 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 STX19Q8N4C7 294 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 OR1N1Q8NGS0 311 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 ADOQ96SZ5 270 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 PLA2G12AQ9BZM1 189 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 POLR2J2Q9GZM3 115 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 DSN1Q9H410 356 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 EGLN3Q9H6Z9 239 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 PLCXD1Q9NUJ7 323 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 FKBP14Q9NWM8 211 aa11.7□□□□□ -0.54
TNFAIP3-209ENST00000619035 RALGAPA1Q6GYQ0 2036 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 NPIPB9F8W1W9 429 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 M0R082 166 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ADAM11O75078 769 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 CNOT3O75175 753 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ALOX12BO75342 701 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 REM1O75628 298 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 PTHP01270 115 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ST13P50502 369 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 EMP2P54851 167 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 DCAF7P61962 342 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 DESI1Q6ICB0 168 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ANKRD37Q7Z713 158 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 CADM2Q8N3J6 435 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TCEANCQ8N8B7 351 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 GNPDA2Q8TDQ7 276 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ADIPOR1Q96A54 375 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 LRFN5Q96NI6 719 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF559Q9BR84 538 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 CRB3Q9BUF7 120 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ULBP3Q9BZM4 244 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 WWTR1Q9GZV5 400 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC26A1Q9H2B4 701 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TMEM27Q9HBJ8 222 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TVP23BQ9NYZ1 205 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 AKAP7Q9P0M2 348 aaPredicted RBP11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 SERINC4A6NH21 518 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 CD36P16671 472 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 GSTM3P21266 225 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 IL12BP29460 328 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TGFBR2P37173 567 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 E2F1Q01094 437 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 MC2RQ01718 297 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 COX10Q12887 443 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 ACSM5Q6NUN0 579 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 MBOAT2Q6ZWT7 520 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 P2RY8Q86VZ1 359 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TOR1AIP2Q8NFQ8 470 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 MYDGFQ969H8 173 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC35B4Q969S0 331 aa11.69□□□□□ -0.54
TNFAIP3-209ENST00000619035 TEX51A0A1B0GUA7 166 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 SCDO00767 359 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 CDX4O14627 284 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 FMO6PO60774 539 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 GABARAPO95166 117 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 UTS2O95399 124 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 IL33O95760 270 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 OMPP47874 163 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 CLDN6P56747 220 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 PLCXD2Q0VAA5 305 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 ANKDD1AQ495B1 522 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLX4IPQ5VYV7 408 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 CASP12Q6UXS9 341 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 GRAMD2AQ8IUY3 354 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 NAXDQ8IW45 347 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 ZNF527Q8NB42 609 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 THAP3Q8WTV1 239 aaPredicted RBP11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 C8orf44Q96CB5 159 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 SH3GL3Q99963 347 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 PRSS27Q9BQR3 290 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 UBQLN4Q9NRR5 601 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 CLN6Q9NWW5 311 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 SLC39A1Q9NY26 324 aa11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 MRTO4Q9UKD2 239 aaKnown RBP11.68□□□□□ -0.54
TNFAIP3-209ENST00000619035 VSTM2BA6NLU5 285 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 OR6C76A6NM76 312 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 B4E171 279 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 GNB5O14775 395 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 PRKYO43930 277 aa11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 KLK3P07288 261 aaPredicted RBP11.67□□□□□ -0.54
TNFAIP3-209ENST00000619035 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms