RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 GPR32P1Q8NGA4 272 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 OR5W2Q8NH69 310 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 FAR1Q8WVX9 515 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 FIG4Q92562 907 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 ARSGQ96EG1 525 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 PINK1Q9BXM7 581 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 LRMDAQ9H2I8 198 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 RLIMQ9NVW2 624 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 EGFL7Q9UHF1 273 aa17.92■□□□□ 0.46
UPF3A-211ENST00000618700 ANKUB1A6NFN9 424 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 TTLL8A6PVC2 850 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 GSTA4O15217 222 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 TPST1O60507 370 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 HPNP05981 417 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 CELA3AP09093 270 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 KCNJ5P48544 419 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 DSCR4P56555 118 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-211ENST00000618700 C19orf57Q0VDD7 668 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 BNIP2Q12982 314 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 GANABQ14697 944 aaKnown RBP17.91■□□□□ 0.46
UPF3A-211ENST00000618700 GLIPR1L2Q4G1C9 344 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 LRRC23Q53EV4 343 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-211ENST00000618700 SMYD1Q8NB12 490 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 BHLHE22Q8NFJ8 381 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-211ENST00000618700 SLC35B4Q969S0 331 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 SLX1AQ9BQ83 275 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 THTPAQ9BU02 230 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 OR2B2Q9GZK3 357 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 ARMC7Q9H6L4 198 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 OLAHQ9NV23 265 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 ASF1BQ9NVP2 202 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 MAGEL2Q9UJ55 1249 aa17.91■□□□□ 0.46
UPF3A-211ENST00000618700 TMEM229AB2RXF0 380 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 SYT5O00445 386 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 ADAM11O75078 769 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 CYP7B1O75881 506 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 DNAJC8O75937 253 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 PDE5AO76074 875 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 WISP2O76076 250 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 NCK1P16333 377 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 SRD5A2P31213 254 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 MSX2P35548 267 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 TDGF1P3P51864 188 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 ELOAQ14241 798 aaKnown RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 DUSP7Q16829 419 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 ZNF440Q8IYI8 595 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 TMCO5AQ8N6Q1 288 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 FAM83FQ8NEG4 500 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 RASSF5Q8WWW0 418 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 DTNBP1Q96EV8 351 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 CLPTM1LQ96KA5 538 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 CADM1Q9BY67 442 aaKnown RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 TSPAN10Q9H1Z9 355 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 PTGES2Q9H7Z7 377 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 ACKR4Q9NPB9 350 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 AGPAT4Q9NRZ5 378 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 MRPS18CQ9Y3D5 142 aaKnown RBP17.9■□□□□ 0.46
UPF3A-211ENST00000618700 SNX13Q9Y5W8 968 aa17.9■□□□□ 0.46
UPF3A-211ENST00000618700 ARPC2O15144 300 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 GMFGO60234 142 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 ZIC3O60481 467 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 IFNA14P01570 189 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 IGHG3P01860 377 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 C8BP07358 591 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 DPP4P27487 766 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 MLLT10P55197 1068 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 PLPPR5Q32ZL2 321 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 CYBRD1Q53TN4 286 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 GLYATQ6IB77 296 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 PGM2L1Q6PCE3 622 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 ARSKQ6UWY0 536 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 ASRGL1Q7L266 308 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 CPT1CQ8TCG5 803 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 GPR119Q8TDV5 335 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 PCDHAC1Q9H158 963 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 MUC13Q9H3R2 512 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 GORASP2Q9H8Y8 452 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 MED17Q9NVC6 651 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 DKKL1Q9UK85 242 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 LIPGQ9Y5X9 500 aa17.89■□□□□ 0.45
UPF3A-211ENST00000618700 HEATR5AQ86XA9 2040 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 PCNX3Q9H6A9 2034 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 A0A087WZY1 265 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 B8ZZF3 427 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 NPIPA5E9PKD4 350 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 ETV2O00321 342 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-211ENST00000618700 FAAHO00519 579 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 GSC2O15499 205 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 LGI1O95970 557 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 LINGO3P0C6S8 592 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 ME2P23368 584 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 SLC6A8P48029 635 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 CCR4P51679 360 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 EPS8Q12929 822 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 CBFBQ13951 182 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 SLC10A1Q14973 349 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 NRF1Q16656 503 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 TMEM44Q2T9K0 475 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 OR52E4Q8NGH9 312 aa17.88■□□□□ 0.45
UPF3A-211ENST00000618700 SLC26A7Q8TE54 656 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms