RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SLC22A25Q6T423 547 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 IKBIPQ70UQ0 350 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 SLC44A2Q8IWA5 706 aaPredicted RBP3.99□□□□□ -1.77
SNCA-213ENST00000618500 PIGXQ8TBF5 258 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 PBKQ96KB5 322 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 DOK1Q99704 481 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 GIMAP4Q9NUV9 329 aa3.99□□□□□ -1.77
SNCA-213ENST00000618500 MAP1AP78559 2803 aaPredicted RBP3.99□□□□□ -1.77
SNCA-213ENST00000618500 OR6C65A6NJZ3 312 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ZNF195O14628 629 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 TIMM23O14925 209 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 KCNH1O95259 989 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 MTHFD2P13995 350 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 DAOP14920 347 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SERPINF1P36955 418 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FRG2Q64ET8 278 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 RNF165Q6ZSG1 346 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 COMMD6Q7Z4G1 85 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 GOLGA7Q7Z5G4 137 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ABHD12BQ7Z5M8 362 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 ISCA2Q86U28 154 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 UBASH3BQ8TF42 649 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 RNF145Q96MT1 663 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FOXN4Q96NZ1 517 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FRG2BQ96QU4 278 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 CITED1Q99966 193 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 RTN4RQ9BZR6 473 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SERHL2Q9H4I8 314 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 C12orf49Q9H741 205 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 METTL17Q9H7H0 456 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 CXorf36Q9H7Y0 433 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 PCDHGB1Q9Y5G3 927 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ATP23Q9Y6H3 246 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 CCDC151A5D8V7 595 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FAM181BA6NEQ2 426 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ZNF716A6NP11 495 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SAP18O00422 153 aaKnown RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 OR7A17O14581 309 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SCO2O43819 266 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 EIF4E2O60573 245 aaKnown RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 OXSR1O95747 527 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 FGGP02679 453 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 F7P08709 466 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 CTAGE8P0CG41 777 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 GAAP10253 952 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ACHEP22303 614 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ENPP1P22413 925 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FRKP42685 505 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 SH3BGRP55822 239 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 TAGLNQ01995 201 aaKnown RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 SPOCK1Q08629 439 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 GTF2H2Q13888 395 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 IQCCQ4KMZ1 466 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SPIN4Q56A73 249 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 GTF2H2CQ6P1K8 395 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 MTDHQ86UE4 582 aaKnown RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 CTAGE4Q8IX94 777 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 CCDC116Q8IYX3 515 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 TMEM86BQ8N661 226 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 B4GALNT2Q8NHY0 566 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ABHD3Q8WU67 409 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 ST8SIA1Q92185 356 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 DVL3Q92997 716 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 STACQ99469 402 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 TMPRSS13Q9BYE2 586 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 TBL1XR1Q9BZK7 514 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 DENND2DQ9H6A0 471 aaPredicted RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 UNKLQ9H9P5 680 aaKnown RBP3.98□□□□□ -1.77
SNCA-213ENST00000618500 PRSS50Q9UI38 385 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 FBXL3Q9UKT7 428 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 SLC9A8Q9Y2E8 581 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 MPDZO75970 2070 aa3.98□□□□□ -1.77
SNCA-213ENST00000618500 GLOD5A6NK44 160 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 FAM159BA6NKW6 160 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ITGA5P08648 1049 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 IGFBP1P08833 259 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 STMN1P16949 149 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 IL2RGP31785 369 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MPIP34949 423 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 P2RX1P51575 399 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MAP2K6P52564 334 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SLC12A2P55011 1212 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CORO7P57737 925 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 SLC18A2Q05940 514 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ZNF155Q12901 538 aaPredicted RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 TRAF3Q13114 568 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MLC1Q15049 377 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ACAP2Q15057 778 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 LTB4RQ15722 352 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ADIPOQQ15848 244 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 GRTP1Q5TC63 336 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CAVIN1Q6NZI2 390 aaKnown RBP3.97□□□□□ -1.77
SNCA-213ENST00000618500 C3orf33Q6P1S2 294 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 MARCH3Q86UD3 253 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CCDC36Q8IYA8 594 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 CNPY4Q8N129 248 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 IL17RDQ8NFM7 739 aa3.97□□□□□ -1.77
SNCA-213ENST00000618500 ACTRT1Q8TDG2 376 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms