RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 NPIPB15A6NHN6 443 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PRKRAO75569 313 aaKnown RBP13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 UBXN7O94888 489 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 AKR7A3O95154 331 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 UBL3O95164 117 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CRYBA1P05813 215 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZNF8P17098 575 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CD9P21926 228 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 NFYBP25208 207 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CLDN2P57739 230 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZP1P60852 638 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MINDY4Q4G0A6 757 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RGS7BPQ6MZT1 257 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 NAA40Q86UY6 237 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TMPRSS12Q86WS5 348 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR2T33Q8NG76 320 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR1M1Q8NGA1 313 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 STOML3Q8TAV4 291 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 HRASLSQ9HDD0 168 aa13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MEPEQ9NQ76 525 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FEZF1A0PJY2 475 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RNASET2O00584 256 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CASC3O15234 703 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MED18Q9BUE0 208 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KCMF1Q9P0J7 381 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TMEM129A0AVI4 362 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 KPNA3O00505 521 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SEMA7AO75326 666 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CXCL14O95715 111 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 HLA-DQA2P01906 255 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SNRNP70P08621 437 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 DRD2P14416 443 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 HOXA1P49639 335 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 LAMA3Q16787 3333 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ZNF627Q7L945 461 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CTSFQ9UBX1 484 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RTTNQ86VV8 2226 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 RBBP9O75884 186 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ATP1B2P14415 290 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 GSTM3P21266 225 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 CCR4P51679 360 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PEA15Q15121 130 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FIGNL1Q6PIW4 674 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TMEM220Q6QAJ8 160 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 FAM219AQ8IW50 185 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 ARL14Q8N4G2 192 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 SIRT6Q8N6T7 355 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 WDSUB1Q8N9V3 476 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 OR4C6Q8NH72 309 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 THAP4Q8WY91 577 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PEX11GQ96HA9 241 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 MCHR1Q99705 422 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 PTDSS2Q9BVG9 487 aa13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
TNFRSF11A-205ENST00000616710 A0A087WUU8 490 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 STK25O00506 426 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CLUP10909 449 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NQO2P16083 231 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ATF1P18846 271 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PDHA2P29803 388 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MAT2AP31153 395 aaKnown RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CCR9P51686 369 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CTAG1AP78358 180 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FAM76BQ5HYJ3 339 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CHST4Q8NCG5 386 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 C17orf47Q8NEP4 570 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GPR32P1Q8NGA4 272 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ACOT11Q8WXI4 607 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ZNF354BQ96LW1 612 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FAM96BQ9Y3D0 163 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 BACE2Q9Y5Z0 518 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SIRT4Q9Y6E7 314 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 C7orf66A4D0T2 115 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 EIF3GO75821 320 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 HMGN1P05114 100 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TBXA2RP21731 343 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TBPL1P62380 186 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OCLNQ16625 522 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 LIPJQ5W064 366 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SSX9Q7RTT3 188 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms